Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04590 ATGGTTTACTCCTTTTATAACTCCAATGATTTTTCTTCCCCCGGCTACGATGTTTCGAGGTTGATTAGTCCTTCTTTGCATGACTATGGAGCTTCCTATGGTGTTTTGGAACCATCACATGCATTGATTTTGGAGAGTGAAAAGATAGAGCAAGTGAATAATGGATCAGAAGATGCAAGGGTAGGAAAGAATTATGAGAACTCTGATGCAAAAGCCTTGGCTGCTTTGAAGAATCACAGTGAAGCTGAGAGGAGGAGGAGGGAGAGAATCAATGGTCATCTTGCAACTCTACGAGGTCTTGTTTCCTCCACTGACAAGATGGACAAAGCAACAATATTAGCAAAAGTCGTTAGCCAAGTGAAGGAATTGCAGAGGAATGCAATGGAAGCAAGTAAAGGTCTTCTAATCCCAACAGATTTTGATGAAGTTGAAGTTGAACCATATGAAGATCATAGATCCATGTCATACAAGGCATCCATCTGCTGCGATTACCGGCCGGAGATTCTCTTCGACCTGCGACACACACTTGATGCCCTTGAACTGCAACTGGTGAGGGCAGAGACATCAACCTTAGAAGGAAGAATGAAAAATGTGTTTGTGTATAGATGTTGCAAAGGGAAAGGTGACAATAATAACACCGAGGCATGTCAAGCTCTTGCGAGAAATGTTCAAAAGGCACTGAGTCGTGTAATAGATAAGGCTTCTAATGCACTTGAGTACTCACTCAGAGCTTCACTTCCATGTAAGAGGAGAAGAATCTGCTTGCTCGAGAATTGA 777 0.4247 MVYSFYNSNDFSSPGYDVSRLISPSLHDYGASYGVLEPSHALILESEKIEQVNNGSEDARVGKNYENSDAKALAALKNHSEAERRRRERINGHLATLRGLVSSTDKMDKATILAKVVSQVKELQRNAMEASKGLLIPTDFDEVEVEPYEDHRSMSYKASICCDYRPEILFDLRHTLDALELQLVRAETSTLEGRMKNVFVYRCCKGKGDNNNTEACQALARNVQKALSRVIDKASNALEYSLRASLPCKRRRICLLEN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04590 258 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 123 IPR011598 GO:0046983
Arst3g04590 258 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 126 IPR036638 GO:0046983
Arst3g04590 258 SMART finulus 80 129 IPR011598 GO:0046983
Arst3g04590 258 Pfam Helix-loop-helix DNA-binding domain 78 124 IPR011598 GO:0046983
Arst3g04590 258 Gene3D - 71 132 IPR036638 GO:0046983
Arst3g04590 258 PANTHER TRANSCRIPTION FACTOR BHLH30 53 254 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04590 Arst-Chr3 121198522 121202105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04590 15 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 33.040 4.16e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g04590 HLH 2.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04590 - - gmx:100818879 293.893