Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04574 ATGCTTCCTTTACAAAGGCCTGAGCTCTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAGGGCATCTTATTATTTGGGCCCCCTGGAACAGGTAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTAAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCACCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGAAGGGAAAATCCTGGGGAGCACGAGGCCATGCGAAAAATGAAAAATGAATTTATGGTGAACTGGGATGGCTTACGTACAAAGGATACCGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAGATATTGAAAGTTATTTTGGCAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCGCACCGTCCGATTAAAGAGATATTAGAAAAGGAGAAAAAGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTGCTCCAGCATTAAGTGGAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCAAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCAATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATGTGA 861 0.4321 MLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDFDAIANMTEGYSGSDLKNLCVTAAHRPIKEILEKEKKEHAAALAEGRPAPALSGSSDIRSLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKALSYFM 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04574 286 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 1 156 - -
Arst3g04574 286 Pfam AAA+ lid domain 175 214 IPR041569 -
Arst3g04574 286 Gene3D - 2 261 IPR027417 -
Arst3g04574 286 Pfam ATPase family associated with various cellular activities (AAA) 22 151 IPR003959 GO:0005524|GO:0016887
Arst3g04574 286 Gene3D - 154 248 - -
Arst3g04574 286 SMART AAA_5 18 155 IPR003593 GO:0016887
Arst3g04574 286 ProSitePatterns AAA-protein family signature. 125 144 IPR003960 GO:0005524|GO:0016887
Arst3g04574 286 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 285 - -
Arst3g04574 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 262 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04574 Arst-Chr3 121025528 121028645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04574 16 230 Calmodulin-binding Proteins AT3G56690 41.892 2.77e-42 153