Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04537 ATGGCGGGTTTGATTGATCTCAACACCACGGAGGACGATGAAACGCCGTCGTATGGTTCCTACGCTGCTTCTCCATCTTCTTCCTCCTCGCACTCGGGAACAAGCACTGCTTCTGTTTCAGCTTCAGCTCCGGTTGTTCCTGGTTCTTCTTCTAACTCCGTGTGTTTGGAGCTGTGGCACGCGTGTGCAGGTTCAATGATCTCGTTGCCGAAGAAGGGAACTCTTGTTGTGTACTTCCCACAGGGACACTCTGAGCAGCAACTTCACGATTTTCCTCTCTCTAACAACAATAACAGCATCCCACCCCATGTGTTCTGTCGCGTTCTCGATGTTAAGCTCCATGCAGAGGAAGGGAGTGATGAAGTGTATTGCCAGGTTTTGCTTGTTCCTGAAAATGAGGAAGGGGATATTGAGGCTGATGGTGAAGAGGAGGACACGGATGCTGTGATGAAGGCAACAACACCCCACATGTTTTGCAAGACTCTGACAGCTTCCGATACCAGCACTCATGGTGGATTCTCGGTTCCCCGTCGTGCAGCTGAAGATTGCTTTCCTCCACTGGATTATAGTCAACAGAGGCCATCACAAGAGCTTGTAGCAAAGGATCTGCATGGCCGGGAATGGAAGTTTCGACATATTTACAGGGGGCAGCCACGAAGGCATTTGCTTACCACCGGATGGAGTGCATTTGTGAACAAGAAGCAGCTGGTGTCTGGAGATGCTGTCCTGTTTCTTAGGGGGGCAGATGGTGAACTGAGATTGGGAATTCGTAGGGCAGGTCAATTGAAAAGTGATGGTAAATTTTCAGCTCTCCCTCACCAGCAGTTGAATCATAGCACTCCTGTGGAAGTGATTAATGCTCTGTCTTCAAGATGTGCCTTCAGTGTTCACTATAACCCAAGGGTTAGTTCATCAGACTTCATCATACCTGTCCACAAATTCTTGAAGAGCCTTGATTATTCATATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACCGAAGATGCTGCAGATCGAAGAATCACAGGATTAATTATTGGGATTAATGATGTTGATCCTGTCAGATGGCCCGGATCAAAATGGAGATGCCTGCTGGTAAGGTGGGATGACTTAGAAACCACACGGCATAACAGGGTTTCTCCATGGGAGATTGAGCCATCAGGTTCTGCTTCCACTGCCAGTAGCCTGATGACAGCTGGTTTGAAGAGGAGCAAGATTGGATTGCCTTCAGTACAGCTAGAATTTCCAGTTCCCAATGGCATCAGTACATCAGACTTTGGGGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATAATCCTGTCAATGGTATTAATGCTCAGTGTCACCAATTATCGGAACTAAGAAGGTGCTATCCTGGATTTACCACAGCAGGACATGGTACAATCCCACAAGTGAGTTCCGATGCTTCCTGCAATGGCATAGGCTTTGGTGAATCTTTCCGATTCCAAAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAATGGTCGCCTCGGAGCTTTTGATGGTTACCAGATGCTAAGGTCCAGAAATGGATGGTCTGCGCATATGAATAGCAATTCTTCTCATTTGCATGCACCCTTTTCATCTGGTCAACTCTCATCTCCATCATCCGTGTTGATGTTCCAGCAAGCATTTAATCCAGTTTCAAACTCTGATTATAGCAACAAAGCTAATCAGGTGAAGGGTGGTAAAGCACTTCAACGAGGTTCATATGCTTCTGAAGTTGATGGTGGAACGAATGCTTCCTTCCCATCTTATGAGACAACTTTCCATGGGAAAGCTCAGGAAGGAAAAAATTCTTTCACTTTTTTAAATCTGCATGATCAGTTGGGTGGTAGTCCACGTTCACCTGATTCAAGATCAGAGCCGAGAGGAAGTCAAGAGCTGGTTTCTTCATGTAAAAGCAACTGCAGAGTCTTTGGTTTTTCACTAACCGAGGGTGCTCCCGTTGCAAATGAAGAGACTGACCCCTCTACAGTCACTTTTCAATTAAATTCTGGGCCTTCTTTTACAAGACATTGCCAATGA 2088 0.4602 MAGLIDLNTTEDDETPSYGSYAASPSSSSSHSGTSTASVSASAPVVPGSSSNSVCLELWHACAGSMISLPKKGTLVVYFPQGHSEQQLHDFPLSNNNNSIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPENEEGDIEADGEEEDTDAVMKATTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGQPRRHLLTTGWSAFVNKKQLVSGDAVLFLRGADGELRLGIRRAGQLKSDGKFSALPHQQLNHSTPVEVINALSSRCAFSVHYNPRVSSSDFIIPVHKFLKSLDYSYSVGMRFRMRFETEDAADRRITGLIIGINDVDPVRWPGSKWRCLLVRWDDLETTRHNRVSPWEIEPSGSASTASSLMTAGLKRSKIGLPSVQLEFPVPNGISTSDFGESLRFQKVLQGQEILGVNNPVNGINAQCHQLSELRRCYPGFTTAGHGTIPQVSSDASCNGIGFGESFRFQKVLQGQEILPSQPYGNGRLGAFDGYQMLRSRNGWSAHMNSNSSHLHAPFSSGQLSSPSSVLMFQQAFNPVSNSDYSNKANQVKGGKALQRGSYASEVDGGTNASFPSYETTFHGKAQEGKNSFTFLNLHDQLGGSPRSPDSRSEPRGSQELVSSCKSNCRVFGFSLTEGAPVANEETDPSTVTFQLNSGPSFTRHCQ 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04537 695 SUPERFAMILY DNA-binding pseudobarrel domain 152 271 IPR015300 -
Arst3g04537 695 SMART B3_2 158 260 IPR003340 GO:0003677
Arst3g04537 695 MobiDBLite consensus disorder prediction 672 695 - -
Arst3g04537 695 MobiDBLite consensus disorder prediction 669 695 - -
Arst3g04537 695 FunFam Auxin response factor 321 392 - -
Arst3g04537 695 Pfam Auxin response factor 285 365 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst3g04537 695 Gene3D - 321 395 - -
Arst3g04537 695 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 52 669 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst3g04537 695 MobiDBLite consensus disorder prediction 10 43 - -
Arst3g04537 695 MobiDBLite consensus disorder prediction 625 648 - -
Arst3g04537 695 Gene3D - 156 259 IPR015300 -
Arst3g04537 695 MobiDBLite consensus disorder prediction 1 43 - -
Arst3g04537 695 FunFam Auxin response factor 156 260 - -
Arst3g04537 695 CDD B3_DNA 156 258 IPR003340 GO:0003677
Arst3g04537 695 Pfam B3 DNA binding domain 158 259 IPR003340 GO:0003677
Arst3g04537 695 ProSiteProfiles B3 DNA-binding domain profile. 158 260 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04537 Arst-Chr3 120684465 120689928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04537 157 509 B3 DNA Binding Superfamily AT2G33860 60.056 5.76e-146 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst3g04537 B3 8.5e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04537 K14486 - gmx:100808119 963.755