Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04530 ATGACATGGTGCAATAGATCATCAGTTGTGGAGAGGGGAATCGAAATAATCAACCACCCTAATCTCAATATTATTGCAATCCCTAGAAATAGTAATGACAATAATAATAGTGTTATTAGTGTTACTCATCACGCAAATACTCCTCCTAAACCAACCGAAATCCGAGCCGTTACTTGCCCCTCTTGTGGTCATAACATTCAAATACAACAAGATCAGGGTGGGGGAATTCAAGACTTGCCAGGATTGCCAGCTGGAGTGAAATTTGATCCGAATGACCAAGAGATACTGGAGCATTTGGATGCAAAAGTGCAGTCTGATGTGAGAAAGCTTCATCCTCTAATTGATGAGTTCATACCAACTCTTGAGGGCGAGAATGGAATTTGCTATACTCACCCAGAGAAGCTTCCAGGAGTAAGCAAAGATGGACAAGTGCGTCACTTCTTTCACAGGCCTTCAAAAGCATACACAACGGGAACAAGGAAGAGAAGAAAGGTTCACACCGACCAAGAAGGAAGCGAGACTAGGTGGCACAAAACTGGCAAAACCAGACCCATCTCTGTGGCTGGTTCCGTTAAGGGTTTCAAGAAGATTCTTGTTCTCTACACCAACTATGGCAGGCAGAAGAAGCCCGAGAAGACCAACTGGGTCATGCATCAGTACCATCTCGGCTCCAACGAAGAAGAAAAAGACGGCGAGCTCGTCGTTTCTAAGGTTTTCTATCAAACACAGCCTCGACAATGTGCAAATAAGGATCCTTATGATGAAAGATTATTGATGACTTCACAAATCAACAGTGTCAATGACATTAGCATGCACGCACTACCCAAGAACAATGCAGGTTTTGTGGATTATTATAACCCCGGTTTCATGAATATGAATTATGAACAGATGAACGAGACTACCTCACCGCAACTGATTCCGAATATGGTGGTGCAAGGTGACAGCTCTTCTTTCATTCGGTTAGCCATGGATGCAAACAAACCCAGGTTGGACAGAAAGTAG 1002 0.4351 MTWCNRSSVVERGIEIINHPNLNIIAIPRNSNDNNNSVISVTHHANTPPKPTEIRAVTCPSCGHNIQIQQDQGGGIQDLPGLPAGVKFDPNDQEILEHLDAKVQSDVRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDQEGSETRWHKTGKTRPISVAGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCANKDPYDERLLMTSQINSVNDISMHALPKNNAGFVDYYNPGFMNMNYEQMNETTSPQLIPNMVVQGDSSSFIRLAMDANKPRLDRK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04530 333 Pfam No apical meristem (NAM) protein 83 222 IPR003441 GO:0003677|GO:0006355
Arst3g04530 333 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 40 271 IPR044799 GO:0003700
Arst3g04530 333 SUPERFAMILY NAC domain 77 241 IPR036093 GO:0003677|GO:0006355
Arst3g04530 333 Gene3D NAC domain 91 245 IPR036093 GO:0003677|GO:0006355
Arst3g04530 333 MobiDBLite consensus disorder prediction 159 182 - -
Arst3g04530 333 FunFam NAC domain-containing protein 73 91 245 - -
Arst3g04530 333 MobiDBLite consensus disorder prediction 161 180 - -
Arst3g04530 333 ProSiteProfiles NAC domain profile. 82 241 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04530 Arst-Chr3 120590174 120593974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04530 1 327 NAC Transcription Factor Family AT1G28470 58.209 4.77e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g04530 NAM 5.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04530 - - gmx:100783888 465.307