Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04524 ATGGAGGGGGAGGGTGGTTCAGAGGGAGAGAATAATCAGAGAAGGGGTGGCACAGATGATAATAGCAATGAAAATATCAATGGAAGCAATAGCAAAGTTGCGAATTCCAATGAGGGGCAGAGCAAGCCCAAGCGCCAGATGAAGACACCCTATCAACTCGAAACCCTCGAGAAAGCTTATGCCTTGGAGACGTACCCTTCTGAGGCTATGAGGGCCGAGCTATCGGAGAAATTGGCGTTGTCTGATCGGCAGCTGCAGATGTGGTTTTGCCACCGGAGGCTGAAAGACAAGAAAGACTTGCCCCCCAAGAAGCCGCCGAAGAAGGCCGTGGAGAAAGTGCGGGAGCCAGAGCCTGAACCAGTGCCGGATTCCCCAGTGGATGACCACAGATTGGGCCCCGAGCTAGGCAATGAGGATGGATCCGGGTCTGGTTCTGGGTCAAGCCCGTTTACCCGGTCAGAGTCCAGGAGTGTGGCGCCACGGGGTTATTATGAATCACAGCAGGCTGCGCTCGAGCTCAGAGCAATTTCTTGTGTGGAGGCACAGTTAGGGGGGCCATTGAGGGAAGATGGACCCATTCTAGGAATAGAGTTTGATGCATTGCCACCAGATGCATTTGGGGCGCCCTTAGCAACCATTGCAGAACAGCAGAAGCGACCAAGTCATGCCTATGACAGTAAAGTTTATGAAAGACATAATGCTAGACCAAATAAGGCTATGTCAAGGGCATTCCATGAATATCAATTTCTACGGAACCAGGCTGGCCCCAGGTCTGATGGTTTTGGACAATATCCCCAACATCATTTACATGATCCGATGGAAGGTCCTGCAAGAAATACCCATTTTGCACATGGAACTGAACAGTTACATAGAAGTCATGCTACCCAAGGTCATTCTTCTCGAGTCCGTATTTTACCTCAACAAGATAAGCAAGGGATTCCTCATCCATCTCCTCCTCAAGATGATGATGTTGCTTCCCAAAAGCAATTGCACACAAATGTAGTGAACACTGGAGTGAACTCTCATTCTACTGATTACCAAATTGTTGGGCCCGAAAATCCCTATAACCCACCAGGTGGACAAGTTTCCCATATCACTACAATGCAGATTGAGAAAAAACGAAAGAGTGATGATGCTAGAAGTGCAAGGGAAGTTGAAGCCCATGAGATGAGGATCAAGAAAGAGCTTGAGAAACAAGATAACCTTAGACGAAAGAATGAAGAGCGAATGAGGAAAGAAATGGAGAGACAAGATCGTGAAAGAAGGAAGGAAGAAGAAAGGTTGATGCGTGAGAGACAGCGAGAAGAGGAAAGATTAAGGCGTGAGCAAAAACGTGAGCTCGAACGAAGGGAAAAGTTTTTGCTGAAAGAAAATTTGAAAGCTGAGAAAATGAGGCAAAAGGAAGAGCTTCGCAAAGAGAAAGAAGCAGAGAGACGCAAAGCTGCCTTGGAGAAGGCAACTGCTCGTAGAATAGCCAAGGAATCCATGGAACTAATTGAAGACGAACAACTGGAATTGATGGAGCTTGCTGCTTCAAGCAAGGGATTGTCCTCTATAATTCATCTTGATTTTGATACTCTGCAAAACCTTGAATCATTTAGGGATTCATTGTGTGTTTTCCCACCTAAGAGTGTAAAGCTAAGAAAACCATTTGCGATCCAACCCTGGATTAACTCAGAAGAGAATGTTGGCAACCTTCTCATGGTTTGGAAATTTTTGATTACTTTTGCTGATATTCTTGAGTTGTGGCCTTTTACTCTCGATGAGTTTGTGCAAGCTTTTCATGATTATGATTCAAGACTGTTGGGTGAAATACATGTTGCTCTCCTTAAGGTGATAATAAAAGACATTGCAGATGTTGCAAGGACACCTTCCACTGGATTAGGAATGAGCCAAAATGGTGCAGCTAATTCAGGAGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTTTGACATACGTAATTGGCATAAGCACTTAAATCAGTTGACATGGCCAGAAATTTTTCGACAGCTAGCATTAGCAGCAGGTTATGGACCACAGTTGAAGAAAAGAAATATTACATGGTCATATGCAAATGATAAAGATGAGGGCAGGAGTTGTGAAGATATCATTTCTACACGTGGTGAAGGATTGACAGTACTAGAACTTGCAGAAAAAATTCAGAAATCCGGCCTTCGGGACCTGACAACTAGCAAGACACCGGAGGCCTCGATTTCTGTCGCTTTGACAAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCATCGACATATCGCGTACGTACTGCATTTAGAAAGGATCCAGCGGATGCCGAGTCTATTCTTTTAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCTGATGAGGTTGAACGAGAAGACGATATTGAAAGAGATGATGTTGAAAGATATGATGATGTAGAAAGAGAAGAAGAGTCAGAAAGTGAAGAAGTTGATGATGATCCTGAAGTTGACGATTTGCTAGGTCCTTCAAGTGCTAACAAAACATCTGTTCTGTGTGATGATTTCTCATCTATTGGAAAAGAAAGTTTGGGTCATAAGGTAGAACTTATTCAAGATCAGTTTGAGAAGGATCTTCCGGAGAATGGTACTAAGGATGTGGATGGTTCTAAAGATGCTCATCTTCCAGATGCTATCACTGGACAACCCGTTATTACAAACTTTGAGGAAGATAATATGGAAATTGATGAAAGCAAGACTGGAGAGTCATGGGTTGAAGGGCTTGCAGAAGGAGAATATTCTGATCTCAGTGTAGAGGAACGTTTAAATGCTCTTGTTGTATTGGTTGGTGTAGCAAATGAAGGAAATTCAATCCGCGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCTCAGATAGATAAAATTCGACTGAGAGATGATAATGTAAATAAATCAGATTTTCCATCTATCAATGGGAATAAAGTTGAACCACAATACACAAGTCCTGCTGTGGGGGGGAACCAAAGCCCATTGCTTGACATAAACATTGACAATAATAATAATAATGAGGCATCGCCTAGCACTGCAGAAAATAAAAAGGCTGCAGTTGTACAGAACCTTGCCATGGAAAAGCCCTCAATAGGTCAAGATTACTGCATTGGTCCAGATAACCCTCAAACTCAACTATCTGCTCCCTATTCGAAAAGGTCTCGTTCTCAGTTGAAATCATATATTTCTCACATGGCAGAAGAGATGTCCGTATACAGGTCTTTACCCCTTGGTCAAGATCGCAGACATAATCGCTATTGGCAATTCGTTGCATCTGCTTCTTGCAATGATCCTGGCTCTGGCAGGATCTTTGTTGAATATCTTGATGGCAATTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCTCTTTTTAATTCACTGGATTTGCGTGGGATCAGGGAATCTCATTTGCGCATAATGTTGCAAAAGATTGGAAGTTCCTTCAAAGAAAATGTTAGGAAGAATGCACAATCTGCCAATATTGGAAGCAGAGATGAAACTAATATTAAAAATGAAGCTGATGAAGCAGAGTCCAGTCCTGATTGCCATGCATTGTCTGACAGTCCCAGCAGTACACTCTGTGGCTTGAACTCTGATACATCTGAAACTTCTTCATCATTCAAAATTGAGCTTGGGAAAAGTGAGAGTGAGAAGAAAGGTGCCTTTAGAAGGTATCAAGATTTCCAGAAATGGATGTGGAAAGAATGCTATAACTCATCCATATTATCTGCAATGAAATATGGGAAAATGAGATGCAAACCTCAGGTGGACATCTGTGATATCTGCCTCAACCCTTATTTCTTTGAAGACTCCCATTGCAATTGTTGCCATCGTACTTTTCCCTCAAATAACGGATTTAATTTTTCAAAACATATATTTCAATGTGGGGGCAAGTTGTCCAAAGATATTTGTATTCTGGATTGTTCTCTTCCCTTGCGGACAAGATTGCTTAAGGCCCTGCTGGCTTTTATTGAGGCATCTGTTCCCTCCGAAGCATTTCAATCAACTTGGACAGAAGATACTAGAAGGCATTGGGGTTTGAAGTTAAGCAAATCATCTTCTGTCGAGGAACTTCTTCAGTTATTGACTGTGTTTGAGAGAGCAATAAAGCGAGATTTTTTATCGTCATCCTTCTCAACAACACAAGAATTGTTGGGATCAAGCAGCATGTCAGAGAGTGCTTTTACCGATCCTGAATCTGTTGCTGTACTTCCATGGGTTCCACAGACCACCTCAGCTGTGTCTCTCAGACTCTCTGAGTTTGATGCGTCCATTAGCTATGTTCAGCTTGAAAAATCTGAGCATCGCAGGGAGAAAGAAACTATAGAATACATGCTTCCTTCAAGATCTAATCCTTTCAAATCTAGTAGAGTAGTGGAACCAGCAGACTTGGACCATGATGAATTCATGAAAGTTAGGTCTGCTCCCATGAAAATTGTACAAAGTGGCAATAAACGTGGACGGGGGAATAGTGATAAAGGACGGGGTAAAAAGATAGCTAAAAGAATGCATGATTCCAAACAAGATACTGGCCGCCGCAGTGTTAAGGTCACAGAGAATCTTAGTCAAAGACTAAAACAGCAGGGGCGAGGAGCACAAGGACAAAGTGGTGGACGTGGTCGCCGAACTGTCAGGAAAAGACGAGTGGAAAAGAGGGCTGTTGAAGATTTGCTGCTGGGCCACAAGGCTGGCACACACAGTTCCAATATTGTTAGAGAACCATTGAGAAACCTGGATGAGGAATGGGACGATGATGAAAAGGCAAGTCCCATGACTTCCATCCACATGGGGGCTGTCGACAATAGTAACAGTGCCGAAGAGGCAGATTCTGATGACAATGCTCAAGTAGCAGAGTCCAACGACAATGCTCAAGCAGCAGATTCGGATGAAAATGCTCAAGAAGTGGATTCCGATGACAATCCTCTAGAAGTGGACTCAGATGACAATGCTCAAGCAGTGGACTCGGATGACAATGGCCAAGCAGTGGAATATGATCAAGGAAACTGGGGAATAGGTTTCAATAACACCCCCAACAGGTGGAGTAGGGATGTGGTTGGAATGATGGATGAAGATGTAGAAGCTTCAGACGAGGACAATGACAACAATGTTGGGCTTGAAGAGAACGAAGAGGAAGAATCAGAGGGTGATGATGTTTTGAGTGAGGAGGGTTCAGATGGAATTGCAGATAGAGTTTTGAATGATGACTCGGACTCTGATGATTCTGAAGATTCATCTGATTAG 5316 0.4328 MEGEGGSEGENNQRRGGTDDNSNENINGSNSKVANSNEGQSKPKRQMKTPYQLETLEKAYALETYPSEAMRAELSEKLALSDRQLQMWFCHRRLKDKKDLPPKKPPKKAVEKVREPEPEPVPDSPVDDHRLGPELGNEDGSGSGSGSSPFTRSESRSVAPRGYYESQQAALELRAISCVEAQLGGPLREDGPILGIEFDALPPDAFGAPLATIAEQQKRPSHAYDSKVYERHNARPNKAMSRAFHEYQFLRNQAGPRSDGFGQYPQHHLHDPMEGPARNTHFAHGTEQLHRSHATQGHSSRVRILPQQDKQGIPHPSPPQDDDVASQKQLHTNVVNTGVNSHSTDYQIVGPENPYNPPGGQVSHITTMQIEKKRKSDDARSAREVEAHEMRIKKELEKQDNLRRKNEERMRKEMERQDRERRKEEERLMRERQREEERLRREQKRELERREKFLLKENLKAEKMRQKEELRKEKEAERRKAALEKATARRIAKESMELIEDEQLELMELAASSKGLSSIIHLDFDTLQNLESFRDSLCVFPPKSVKLRKPFAIQPWINSEENVGNLLMVWKFLITFADILELWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIADVARTPSTGLGMSQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNQLTWPEIFRQLALAAGYGPQLKKRNITWSYANDKDEGRSCEDIISTRGEGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRTAFRKDPADAESILLEARKKIQIFENGFLAGEDADEVEREDDIERDDVERYDDVEREEESESEEVDDDPEVDDLLGPSSANKTSVLCDDFSSIGKESLGHKVELIQDQFEKDLPENGTKDVDGSKDAHLPDAITGQPVITNFEEDNMEIDESKTGESWVEGLAEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKIRLRDDNVNKSDFPSINGNKVEPQYTSPAVGGNQSPLLDINIDNNNNNEASPSTAENKKAAVVQNLAMEKPSIGQDYCIGPDNPQTQLSAPYSKRSRSQLKSYISHMAEEMSVYRSLPLGQDRRHNRYWQFVASASCNDPGSGRIFVEYLDGNWRLIDSEEAFDALFNSLDLRGIRESHLRIMLQKIGSSFKENVRKNAQSANIGSRDETNIKNEADEAESSPDCHALSDSPSSTLCGLNSDTSETSSSFKIELGKSESEKKGAFRRYQDFQKWMWKECYNSSILSAMKYGKMRCKPQVDICDICLNPYFFEDSHCNCCHRTFPSNNGFNFSKHIFQCGGKLSKDICILDCSLPLRTRLLKALLAFIEASVPSEAFQSTWTEDTRRHWGLKLSKSSSVEELLQLLTVFERAIKRDFLSSSFSTTQELLGSSSMSESAFTDPESVAVLPWVPQTTSAVSLRLSEFDASISYVQLEKSEHRREKETIEYMLPSRSNPFKSSRVVEPADLDHDEFMKVRSAPMKIVQSGNKRGRGNSDKGRGKKIAKRMHDSKQDTGRRSVKVTENLSQRLKQQGRGAQGQSGGRGRRTVRKRRVEKRAVEDLLLGHKAGTHSSNIVREPLRNLDEEWDDDEKASPMTSIHMGAVDNSNSAEEADSDDNAQVAESNDNAQAADSDENAQEVDSDDNPLEVDSDDNAQAVDSDDNGQAVEYDQGNWGIGFNNTPNRWSRDVVGMMDEDVEASDEDNDNNVGLEENEEEESEGDDVLSEEGSDGIADRVLNDDSDSDDSEDSSD 1771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1640 1655 - -
Arst3g04524 1771 CDD homeodomain 44 93 IPR001356 GO:0003677
Arst3g04524 1771 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 918 961 IPR028942 -
Arst3g04524 1771 ProSiteProfiles HARE-type HTH domain profile. 698 766 IPR007759 GO:0006355
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1198 1228 - -
Arst3g04524 1771 Pfam HB1, ASXL, restriction endonuclease HTH domain 705 765 IPR007759 GO:0006355
Arst3g04524 1771 Pfam Homeodomain 42 98 IPR001356 GO:0003677
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1502 1574 - -
Arst3g04524 1771 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 713 1750 IPR044977 GO:0006357
Arst3g04524 1771 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 713 1750 IPR044977 GO:0006357
Arst3g04524 1771 Coils Coil 385 487 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 18 48 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 796 844 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 397 442 - -
Arst3g04524 1771 ProSiteProfiles DDT domain profile. 560 619 IPR018501 -
Arst3g04524 1771 SMART HOX_1 41 103 IPR001356 GO:0003677
Arst3g04524 1771 SMART testlast3 560 619 IPR018501 -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1513 1539 - -
Arst3g04524 1771 SUPERFAMILY Homeodomain-like 29 98 IPR009057 -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 798 837 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1 52 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 254 280 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 93 161 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 140 155 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1715 1747 - -
Arst3g04524 1771 Pfam DDT domain 561 616 IPR018501 -
Arst3g04524 1771 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1097 1169 IPR028941 -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 93 135 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1598 1613 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1656 1677 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1593 1613 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1208 1228 - -
Arst3g04524 1771 Gene3D - 26 100 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1627 1771 - -
Arst3g04524 1771 MobiDBLite consensus disorder prediction 1540 1559 - -
Arst3g04524 1771 ProSiteProfiles 'Homeobox' domain profile. 39 99 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04524 Arst-Chr3 120519351 120528654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04524 4 1703 Homeobox Transcription Factor Family AT1G28420 45.651 0.0 1250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Arst3g04524 WSD 2.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04524 - - adu:107480767 3049.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04524 3 120519351 120528654 Arst3g04524 3 120519351 120528654 ECH
Arst3g04524 3 120519351 120528654 Arst10g00298 10 2562418 2564532 PCT