Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04491 ATGTTGGTTAATATCATGCCTCCATCAACGACTAACGAATGGACACAGACTCAAATCATAGATGATCAAAATCACAACACCAAAGCTGAAGCTCCACCACCATCATCGTCATCATCAGCTGCTAGGGTTATGGAAAAACAAGGTCAAGAACATGTTCAGCAGCAGCAGCAACAAGCTCTCAAGTGCCCTCGCTGCGATTCATCCAACACCAAATTCTGCTACTACAACAACTACAGCTTATCGCAGCCTAGACACTTCTGCAAAGCCTGCAAGCGATACTGGACAAGAGGTGGAACCCTCCGCAACGTCCCCGTCGGCGGTGGCTGCAGAAAAAACACCAAGCGTCTCAAGCGCCAATCATCTTCTTCCATCGATGCCACTCCTTCTCCTTCTTCTTCTTCCACTCATCCTCCGGCTTCTAATATCAACCCTTTGTTTTATGGGGTACCTAGTAGTAATAATAATAACAACAACAATAACTCTTGTGATTTGTTGAACCTACCTTCTTTCCCTGGGTTCAGAGTGAGTTCTGGGTATGATAATGATGTTCAGCCTCACCTAAGTGGGTTAGGTTTTTCATCAGGGATCATGTCCAATATGGAAGCTACTGGATTTGGTTCAAATGAGAGTAACTCATTTCTTTCGGCCTACAATTCCATCTTCGGTTCGTGTTCTTCATCAGCTTCTACTACCTTGCTGAGTTCCACTCTACTGCAGCATAAATTCATGAATGGTGGTGGATTCCAAGGGCTAGCTACTCCTGAGGTTGAAGAGATGCAAATGAGAGAGAGGCGTGAGGGAGAAAGAGGAGGAGTCATGGGTTGTTCTTCTTTGAAAGAAGTGAAAGGTGAATTATTGGGAGAAGAAAGAGGGAGAGAGAGGTTGGAGTGGCAGAATCAGATGATGGAACATACCATGGGCTTTTCTGATCCCTCTTCTTCGCTTTATTGGAGCACATCATCATCACCCATGGCTGCTTCTTCTTGGAATGATCAACCCAATATTGGTCCTTCTGTCACTTCACTCATCTAG 1032 0.4506 MLVNIMPPSTTNEWTQTQIIDDQNHNTKAEAPPPSSSSSAARVMEKQGQEHVQQQQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNTKRLKRQSSSSIDATPSPSSSSTHPPASNINPLFYGVPSSNNNNNNNNSCDLLNLPSFPGFRVSSGYDNDVQPHLSGLGFSSGIMSNMEATGFGSNESNSFLSAYNSIFGSCSSSASTTLLSSTLLQHKFMNGGGFQGLATPEVEEMQMRERREGERGGVMGCSSLKEVKGELLGEERGRERLEWQNQMMEHTMGFSDPSSSLYWSTSSSPMAASSWNDQPNIGPSVTSLI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04491 343 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Arst3g04491 343 MobiDBLite consensus disorder prediction 323 343 - -
Arst3g04491 343 MobiDBLite consensus disorder prediction 25 55 - -
Arst3g04491 343 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 225 IPR045174 GO:0003700|GO:0006355
Arst3g04491 343 MobiDBLite consensus disorder prediction 119 150 - -
Arst3g04491 343 ProSitePatterns Zinc finger Dof-type signature. 62 98 IPR003851 GO:0003677|GO:0006355
Arst3g04491 343 Pfam Dof domain, zinc finger 58 114 IPR003851 GO:0003677|GO:0006355
Arst3g04491 343 MobiDBLite consensus disorder prediction 104 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04491 Arst-Chr3 120239880 120242165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04491 55 205 C2C2-Dof Transcription Factor Family AT5G65590 47.619 5.31e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst3g04491 zf-Dof 7.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04491 - - ahf:112791485 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04491 3 120239880 120242165 Arst3g04491 3 120239880 120242165 ECH
Arst3g04491 3 120239880 120242165 Arst10g00323 10 2741937 2743199 PCT