Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04490 ATGGAGAAAGAAGGAGAGGTCAGTAAAGAGCAAGTTGCTGGGCCTCTGCCTCCACCTCCGCCTCTGCCTCCGCCTCGGCCGCCGCCACAGCATAAATGCCCACGGTGTGATTCAGACAACACCAAGTTCTGCTACTACAATAACTACAGCCTGTCACAGCCTCGATACTTGTGCAAAGCATGTAAGAGGTACTGGACACAAGGTGGAACCCTCAGGAATATTCCTCTTGGTGCTTCCAAGAACAAGATCAAGAACAAGCCCAACAAGCGTACCTTCAACACTGCTACTACTACTTCTTCTTCCTCTCATCATCATGCTGCTGGTTCTACTGCATCATCATCAGCAGCAGCAGCAGCAACATCAGGGAGCAGCATGGCAGAATATACAACTGCTGCTGCTTCTCACCTTCATCATCAATGGCCCTCTCATGCCAACTACTCTTTCTGGAGTACTACTGTCTGCACCACTTCTTCCATAAGCGCTAATAATAACAACTCTTCTCAGTCACAGACCAATATCATGCCAAGAACAGCAGCTTCTTCCTCTCCTTCTTTCATCACACCAAATCAATGGCCACATCTCAAATGGAACCACCCTATGCCTCCTCCATGA 612 0.4869 MEKEGEVSKEQVAGPLPPPPPLPPPRPPPQHKCPRCDSDNTKFCYYNNYSLSQPRYLCKACKRYWTQGGTLRNIPLGASKNKIKNKPNKRTFNTATTTSSSSHHHAAGSTASSSAAAAATSGSSMAEYTTAAASHLHHQWPSHANYSFWSTTVCTTSSISANNNNSSQSQTNIMPRTAASSSPSFITPNQWPHLKWNHPMPPP 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04490 203 ProSiteProfiles Zinc finger Dof-type profile. 31 85 IPR003851 GO:0003677|GO:0006355
Arst3g04490 203 MobiDBLite consensus disorder prediction 162 183 - -
Arst3g04490 203 MobiDBLite consensus disorder prediction 1 33 - -
Arst3g04490 203 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 168 IPR045174 GO:0003700|GO:0006355
Arst3g04490 203 Pfam Dof domain, zinc finger 30 85 IPR003851 GO:0003677|GO:0006355
Arst3g04490 203 ProSitePatterns Zinc finger Dof-type signature. 33 69 IPR003851 GO:0003677|GO:0006355
Arst3g04490 203 MobiDBLite consensus disorder prediction 88 114 - -
Arst3g04490 203 MobiDBLite consensus disorder prediction 72 114 - -
Arst3g04490 203 MobiDBLite consensus disorder prediction 13 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04490 Arst-Chr3 120219204 120220247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04490 26 144 C2C2-Dof Transcription Factor Family AT4G21050 42.500 7.42e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst3g04490 zf-Dof 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04490 - - aip:107634681 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04490 3 120219204 120220247 Arst3g04490 3 120219204 120220247 ECH
Arst3g04490 3 120219204 120220247 Arst10g00324 10 2754901 2755931 PCT