Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04470 ATGATGCAGATTGATGAAATCAAGACACAGCAAGTAGTAGGAGAAGACGACGATGGCCCGCCACCGGGTTGGCAACCCATCCATACGCCACCGCCACAACCGCCTCCACAGTCACAGTCACGGTCACGGTCACCACCTCGATGTCCATCCACTGATCAGGTTGGACAAGTTAAGTGTGGGGGCTGTGCAGTATTGCTAATGTACCCATATGGTGCTCCACAAGTTAGGTGTTCCTCATGTCGATTTGTGACAGAAATTGGGGCACACAACAAGCGACCTCCATGGTCTGAACAACAAAGGAAACCAACCCTACCTAAAACTGCTTGTTAG 330 0.5091 MMQIDEIKTQQVVGEDDDGPPPGWQPIHTPPPQPPPQSQSRSRSPPRCPSTDQVGQVKCGGCAVLLMYPYGAPQVRCSSCRFVTEIGAHNKRPPWSEQQRKPTLPKTAC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04470 109 MobiDBLite consensus disorder prediction 88 109 - -
Arst3g04470 109 NCBIfam zinc finger domain, LSD1 subclass 56 84 IPR005735 -
Arst3g04470 109 MobiDBLite consensus disorder prediction 23 42 - -
Arst3g04470 109 PANTHER PROTEIN LSD1 52 104 IPR040319 -
Arst3g04470 109 MobiDBLite consensus disorder prediction 1 54 - -
Arst3g04470 109 Pfam LSD1 zinc finger 59 83 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Arst3g04470 zf-LSD1 7.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04470 - - adu:107480804 178.333