Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst3g04467 | ATGGCGTCGCTGTTCGGTTCGTCGTCGGGCTCCACATCGATGGTGGTAACGAACACGCCGTCGCAGGACCTTGCCCTCACCAACCTCGCCTTCTGTTCCTCCTCCGATCTCCGCAACTTCGCCGTCCCCAATCGCTCCAACCTCTTCCTCGCCTTCGTTGGCGACTCCTTCGTCTTCTCTCTCTCAGCTCATGAGAACATTCGCAGTGGCCAGATTGCACTCAATTCCATTCAACGTCGCTGTGTTAAAGTCTCTGCTGCTGAATCCATTCCTGTCACCAGATTTGTGCCACCCGAAAACTTCGACCTGGCATTGTTAACCCTTGAACTGGAATTCATTAAAAAAGGAGCAAAGAGTGAACAGATTGATGCTCCCCAACTGTCTAAGCAACTTCGGAAAAGGTTCGCAAACCAGGTTATGACAGTAGGGCAAAAAGTGTTATTTGAGTATCATGGAAATAATTATAGCTTCACAGTTACACAAGCTGCTGTTGAGGGTCAAGAAAAGACTAATGCTCTTGAAAGAGGGATGATCTCAGATGACACATATGTTGTTTTTGAAACAGCACGTGATAGTGGAATCAAGATTGTCAATCAGCGTGAGGCTGCCACTAGCAACATTTTTAAGCAGAAAGAGTTTAATCTTCAGTCTCTGGGTATTGGAGGCCTGAGTGCAGAGTTTGCAGATATATTTCGAAGAGCTTTTGCCTCCCGTGTTTTCCCTCCCCACGTGACATCGAAATTAGGGATCAAGCATGTGAAGGGCATGTTGCTTTATGGCCCACCTGGAACTGGAAAGACTCTTATGGCCCGGCAAATTGGGAAAATTCTGAATGGGAAGGAACCAAAGATTGTAAATGGCCCTGAAGTTTTGAGCAAATTTGTTGGTGAAACTGAAAAGAATGTGAGGGACCTTTTTGCTGATGCTGAACAAGAGCAGAGGAGCCGAGGGGATGAAAGTGATTTGCATGTAATTATCTTTGATGAAATTGATGCTATTTGTAAGTCAAGAGGTTCAACTCGCGATGGTACTGGAGTTCATGATAGCATTGTGAACCAGCTTCTTACTAAGATAGATGGTGTGGAGTCACTAAATAATGTTTTGCTTATTGGAATGACTAACAGAAAGGATATGCTTGATGAGGCTCTCTTAAGACCAGGGCGGTTGGAAGTCCAGGTTGAGATAAGCCTTCCTGATGAAAATGGACGATTGCAAATTCTTCAAATTCATACTAACAAGATGAAAGAGAATTCTTTTCTTGCTCCCGATGTGAATCTTCAAGAGCTCGCTGCTAGAACAAAAAACTACAGTGGTGCAGAACTTGAAGGTGTTGTGAAAAGTGCCGTCTCATATGCTTTAAATCGACAACTGAGTCTAGAGGATCTCACGAAGCAAGTTGAAGAAGAGAATATTAAGGTTACCATGGATGACTTTTTGAATGCACTCCAAGAGGTTATTCCTGCATTTGGGGCTTCCACTGATGATCTTGAAAGATGCAGACTCCATGGCATGGTTGACTGTGGTGACCGACATAAGCACATCTATCAAAGAGCAATGCTACTAGTGGAGCAAGTAAAAGTAAGCAGAGGAAGCCCACTTGTTACTTGTCTTCTGGAAGGTTCCAGTGGCAGTGGTAAGACCGCACTTGCAGCTACTGTTGGTATTGACAGTGACTTCCCATATGTCAAGATTGTTTCAGCTGAAACAATGATTGGACTACATGAGAGCACTAAATGTGCACAGATCATTAAGGTTTTTGAGGATGCATATAAGTCACCGTTGAGCGTTATTGTCCTTGATGACATTGAGAGGTTATTGGAGTATGTAGCCATTGGTCCCCGGTTTTCAAACTTGATTTCTCAGACACTATTGGTCCTACTCAAACGGCTTCCTCCAAAGGGGAAAAAACTCATGGTTATTGGTACAACAAGCGAATTGACTTTCTTGGACTCAATTGGATTTTGTGATACTTTCTCTGTCACTTACCATGTTCCTACCTTGAGCACAAATGATGCCAAGAAGGTCCTAGAACAGTTGAATGTTTTTGCTCATGAAGATATTGATGCTGCTGCAGAGGCAATGAATGATATGCCTATTAGGAAGCTGTACATGTTGATTGAGATGGCAGCACAAGGGGCTCAAGGTGGATCTGCAGAAGCTATCTATTCTGGCAAAGAGAAGATCAGTATCTCTCATTTCTATGATTGCCTCCAGGATGTTGTCAGAATATAA | 2232 | 0.4364 | MASLFGSSSGSTSMVVTNTPSQDLALTNLAFCSSSDLRNFAVPNRSNLFLAFVGDSFVFSLSAHENIRSGQIALNSIQRRCVKVSAAESIPVTRFVPPENFDLALLTLELEFIKKGAKSEQIDAPQLSKQLRKRFANQVMTVGQKVLFEYHGNNYSFTVTQAAVEGQEKTNALERGMISDDTYVVFETARDSGIKIVNQREAATSNIFKQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEQEQRSRGDESDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVVKSAVSYALNRQLSLEDLTKQVEEENIKVTMDDFLNALQEVIPAFGASTDDLERCRLHGMVDCGDRHKHIYQRAMLLVEQVKVSRGSPLVTCLLEGSSGSGKTALAATVGIDSDFPYVKIVSAETMIGLHESTKCAQIIKVFEDAYKSPLSVIVLDDIERLLEYVAIGPRFSNLISQTLLVLLKRLPPKGKKLMVIGTTSELTFLDSIGFCDTFSVTYHVPTLSTNDAKKVLEQLNVFAHEDIDAAAEAMNDMPIRKLYMLIEMAAQGAQGGSAEAIYSGKEKISISHFYDCLQDVVRI | 743 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst3g04467 | 743 | Pfam | ATPase family associated with various cellular activities (AAA) | 256 | 396 | IPR003959 | GO:0005524|GO:0016887 | |
Arst3g04467 | 743 | Pfam | ATPase family associated with various cellular activities (AAA) | 537 | 650 | IPR003959 | GO:0005524|GO:0016887 | |
Arst3g04467 | 743 | PANTHER | VESICULAR-FUSION PROTEIN NSF | 12 | 742 | IPR039812 | GO:0016887|GO:0035494 | |
Arst3g04467 | 743 | PANTHER | VESICULAR-FUSION PROTEIN NSF | 12 | 742 | IPR039812 | GO:0016887|GO:0035494 | |
Arst3g04467 | 743 | FunFam | Vesicular-fusion ATPase SEC18 | 208 | 398 | - | - | |
Arst3g04467 | 743 | Gene3D | - | 9 | 95 | - | - | |
Arst3g04467 | 743 | Gene3D | - | 494 | 665 | IPR027417 | - | |
Arst3g04467 | 743 | Gene3D | - | 205 | 397 | IPR027417 | - | |
Arst3g04467 | 743 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 231 | 495 | IPR027417 | - | |
Arst3g04467 | 743 | FunFam | Vesicle-fusing ATPase | 99 | 196 | - | - | |
Arst3g04467 | 743 | Pfam | AAA+ lid domain | 423 | 478 | IPR041569 | - | |
Arst3g04467 | 743 | FunFam | vesicle-fusing ATPase isoform X1 | 494 | 665 | - | - | |
Arst3g04467 | 743 | ProSitePatterns | AAA-protein family signature. | 367 | 385 | IPR003960 | GO:0005524|GO:0016887 | |
Arst3g04467 | 743 | Gene3D | - | 99 | 196 | - | - | |
Arst3g04467 | 743 | FunFam | Vesicle-fusing ATPase | 398 | 485 | - | - | |
Arst3g04467 | 743 | CDD | RecA-like_NSF-SEC18_r1-like | 219 | 395 | - | - | |
Arst3g04467 | 743 | SUPERFAMILY | ADC-like | 11 | 95 | IPR009010 | - | |
Arst3g04467 | 743 | Pfam | Cell division protein 48 (CDC48), domain 2 | 121 | 166 | IPR004201 | - | |
Arst3g04467 | 743 | SUPERFAMILY | Cdc48 domain 2-like | 98 | 201 | IPR029067 | - | |
Arst3g04467 | 743 | Gene3D | - | 398 | 485 | - | - | |
Arst3g04467 | 743 | SMART | AAA_5 | 532 | 653 | IPR003593 | GO:0016887 | |
Arst3g04467 | 743 | SMART | AAA_5 | 252 | 399 | IPR003593 | GO:0016887 | |
Arst3g04467 | 743 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 496 | 713 | IPR027417 | - | |
Arst3g04467 | 743 | FunFam | Vesicle-fusing ATPase protein | 11 | 95 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst3g04467 | Arst-Chr3 | 119908229 | 119915817 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst3g04467 | 247 | 463 | Calmodulin-binding Proteins | AT3G56690 | 39.819 | 9.72e-41 | 159 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst3g04467 | K06027 | - | gmx:100779259 | 1297.34 |