Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04457 ATGTACGTTAATTCCATGAGAAAGTCCTTCAAGGACTCCCTCAAGCTCCTTGAAGCTGATATTCAACACGCCAATACCCTGGCGTCAGATTTTTCAAGGGAGTATGATGGTGCATGCCTTCAGATGAGAATGTCATACAGTCCAGCTGCACACCTCTTTCTTTTTTTGGTGCAATGGACTGATTGTCACCTTGCGGGAGCCCTGGGATTGTTGAGAATCCTAATTTACAAGGTTTATGTGGATGGGACAACCACCATGTCTACCCAGGAAAGAAAAGCAAGTATTAGAGAATTCTATGCGGTCATATATCCCTCTTTGTTGCAACTTCAAAAGGGGGTCACTGATACGGAGGATAAGAAACAAAAGGCTGTGTGCATGGAGAGGTATCGTAAAAGAGATGATGAGGAGCATTGGCAGTCTTCTGACATAGACATTGAAAGAGAAGATGAATGTGGGATATGCATGGAAATGAATGGCAAAGTTGTGTTGCCCAACTGCAATCATGCCATGTGCCTGAAATGTTACCGAGAATGGCGAACAATCTCTCAGTCATGCCCATTTTGCCGAGACAGTCTGAAGAGGGTAAACTCTGGCGATCTCTGGGTTTTCACTGACAGGAGAGACATAGTAGATATGGCAACAGTGACAAGGGAGAATCTTAGAAGGCTTTGTATGTACATAGACAAGTTGCCTTTGGTTGTTCCGGACTCCTTTTTTGAGGCCTATGACTCTCACATAAGGTAA 744 0.4409 MYVNSMRKSFKDSLKLLEADIQHANTLASDFSREYDGACLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTQERKASIREFYAVIYPSLLQLQKGVTDTEDKKQKAVCMERYRKRDDEEHWQSSDIDIEREDECGICMEMNGKVVLPNCNHAMCLKCYREWRTISQSCPFCRDSLKRVNSGDLWVFTDRRDIVDMATVTRENLRRLCMYIDKLPLVVPDSFFEAYDSHIR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04457 247 SMART ring_2 151 188 IPR001841 -
Arst3g04457 247 SUPERFAMILY RING/U-box 140 194 - -
Arst3g04457 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 198 IPR013083 -
Arst3g04457 247 FunFam RING/U-box superfamily protein 129 198 - -
Arst3g04457 247 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Arst3g04457 247 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Arst3g04457 247 PANTHER RING FINGER PROTEIN 41, 151 8 244 - -
Arst3g04457 247 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04457 Arst-Chr3 119877429 119881131 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04457 3 119877429 119881131 Arst10g00375 10 3044447 3047090 PCT