Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04444 ATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCAGCATGGACGATGAATCAGGACGTTGGCACGTTGCGTTCTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCGGGCCATCGGAAGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGTAAAGGGGGCATTGGCGTCTCCCGAATCCACAATTTTATGGCGAGCCTGGCCAGCGGGTATCATAATGCCCCGTACACAACAAGGAACATGCACAATGTAAATGCGAAGCAACGAATGGAGGGTGGCCTAGATGCGGAATCGTGCCTAAGGTATCTCCAAGAGTGCAAGGCAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCACTGCACTGGTGACAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAGCAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAAGCAAATGAAGTCTGCGATCGAGCAAAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTGGCCGATAAAAGATGGGTACAGGACATGTACGAGAAAAGGCACAGTTGGGCCACAGCACACATACGGGGAAAGTTCTTTGCCGGATTTCGAACAACATCAAGGTGCGAGGGCTTGCACGCTATGATATCACGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATTCACACCGTCTCTCGATACGGCACTCCGGGGAAGGAGTGGCGTGTTGTTGCAACGTCTGATACAAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTATGAACATATAATTGCGGTGCTTATTCTTAACAATGTTCATGAGATCCCAAGGTCTCTGATATTACCGAGATGGACTAAGGATGCAAAACTTGTGGTGATGCAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGAAAAGTGTGCAAGATTACATGTCACAGCATCGAAAAGTTCCAGTTTGCAAGAGACATTGCCGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGAACACCAGTTTTCCACACGAGGGGCCACCTACTGAGGGTGGCAGACCCCCGGCACGGAATCCACCCAAGCGCAATACAAAGGGTAACGGTGCTCATGGTGGAAAGAAGACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACAACGTGTCCGGAGCGTCGTACAATGGAACCATCCAGCGCAGTTGCAGAAGACATGGATTCGATGGACAATGACATGGTCTATGATAACCTATCCGGCGATCTGTATGCGACCGCGGAGATTCCTTCGTTCCAATGCTCCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCAACTTTGCTGGGACCAACACGTCCGGGCCAGTCATGTCTCTCGCCGATTGA 1575 0.513 MPNRQKRPRAETRCGCPARMLLSMDDESGRWHVAFFSDAHNHHVLELRFSSMLPGHRKMSEADIEQMNDMRKGGIGVSRIHNFMASLASGYHNAPYTTRNMHNVNAKQRMEGGLDAESCLRYLQECKANDPALYYKEVVDVFSGVNHHNQTVVFATALVTDEKEETYVWLLQQLQTSMKGKAPVSIITDGDKQMKSAIEQRKWFEMVEKFGVADKRWVQDMYEKRHSWATAHIRGKFFAGFRTTSRCEGLHAMISRACAMRVVDSEDNGSYFIHTVSRYGTPGKEWRVVATSDTREVRCTCMRMECFGVPYEHIIAVLILNNVHEIPRSLILPRWTKDAKLVVMQSMGVIWDSVQLTQHWCLMDWYRKVCKITCHSIEKFQFARDIAVLMLKHFENEDAGNTSFPHEGPPTEGGRPPARNPPKRNTKGNGAHGGKKTQRCRLCREVGHNRTTCPERRTMEPSSAVAEDMDSMDNDMVYDNLSGDLYATAEIPSFQCSDSDTQAGFANSNFAGTNTSGPVMSLAD 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04444 524 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 386 IPR031052 GO:0006355
Arst3g04444 524 MobiDBLite consensus disorder prediction 399 439 - -
Arst3g04444 524 Pfam MULE transposase domain 142 200 IPR018289 -
Arst3g04444 524 Pfam FAR1 DNA-binding domain 4 45 IPR004330 -
Arst3g04444 524 SUPERFAMILY Retrovirus zinc finger-like domains 426 461 IPR036875 GO:0003676|GO:0008270
Arst3g04444 524 ProSiteProfiles Zinc finger SWIM-type profile. 286 322 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04444 Arst-Chr3 119746183 119748310 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g04444 MULE 4.5e-13 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04444 - - adu:107480712 1095.49