Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04442 ATGAGTTGTGGCTGCTTTGGAGCCTCAACTCTCAAGAAGAAAAGTCCTTCTCCTACTCCCAATGAAATTGACGGCTATCCACTTGATAATGTTAGACATTTCTCTGACAAAGAACTGAGATTGGCTACTGATAATTATCATCCAAGATATAAGATAGGACGAGGAGGTTTTGGAATTGTTTACAAGGGAATCTTAAAAGATGGGAGACAAGTAGCAGTGAAGACCCTTTCAGCTGGGTCAAGGCAAGGAGTTCGTGAATTTTTAACTGAGATTAAAACTATATCAAATGTTAAGCATCCAAACCTTGTTGAGTTGGTCGGTTGCTGTGTTCAAGGGCCTAATCGTATACTAGTCTATGAGTATGTGGAAAATAACAGCCTTGATCGTGCATTACTTGGCACAAGGAGTATAAACATCAGACTAGACTGGAGAAAAAGATCTATTATTTGCATGGGCACTGCGAGGGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACACATCGTGCACAGAGACATCAAAGCGAGCAACATACTACTTGACACAGACTTTAATCCAAAAATAGGAGATTTTGGGTTGGCTAAATTATTTCCTGATGACATCACTCATATTAGCACAAGAATTGCTGGAACAACTGGTTACTTGGCGCCTGAATATGCAATTGGTGGCCAGTTAACCCTGAAGGCTGATGTGTATAGTTTTGGGGTTCTTATACTTGAAATAGTTAGCGGCAGAAGCAGTTCAAGGACAAACTGGGGAGACTCATACAAACTCCTCTTGGAATGGGCATGGCAACTCCATGAAGAGGGGAAGTTGGTGGAGCTTGTGGATCCAGAAATGGGAGAGTTTCCTGAGGAAGAGGTGATTAGGTACATGAAGGTAGCATTCTTCTGCACACAAGCAGCTGCAAGCAGAAGGCCAATGATGTCACAGGTTGTTGATATGTTGTCCAAGAAAACAAAGCTCAATGAGAAGCAACTCACAGCACCAGGTTTCTTCCAAGACTCAGGAGAGTCTTCTCTAAAGAAGTCTTCTGGTGAGTCCACAAGCTATCAGTTTAGCTCTACCCCTGCCAGTATTACACAGGTCAACCCCCGGTAA 1101 0.4278 MSCGCFGASTLKKKSPSPTPNEIDGYPLDNVRHFSDKELRLATDNYHPRYKIGRGGFGIVYKGILKDGRQVAVKTLSAGSRQGVREFLTEIKTISNVKHPNLVELVGCCVQGPNRILVYEYVENNSLDRALLGTRSINIRLDWRKRSIICMGTARGLAFLHEELVPHIVHRDIKASNILLDTDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYAIGGQLTLKADVYSFGVLILEIVSGRSSSRTNWGDSYKLLLEWAWQLHEEGKLVELVDPEMGEFPEEEVIRYMKVAFFCTQAAASRRPMMSQVVDMLSKKTKLNEKQLTAPGFFQDSGESSLKKSSGESTSYQFSSTPASITQVNPR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04442 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Arst3g04442 366 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 349 - -
Arst3g04442 366 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Arst3g04442 366 Pfam Protein kinase domain 47 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04442 366 Gene3D Transferase(Phosphotransferase) domain 1 122 334 - -
Arst3g04442 366 SUPERFAMILY Protein kinase-like (PK-like) 29 346 IPR011009 -
Arst3g04442 366 PIRSF ILK 8 329 - -
Arst3g04442 366 ProSiteProfiles Protein kinase domain profile. 46 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04442 366 MobiDBLite consensus disorder prediction 1 24 - -
Arst3g04442 366 Gene3D Phosphorylase Kinase; domain 1 19 121 - -
Arst3g04442 366 CDD STKc_IRAK 52 318 - -
Arst3g04442 366 SMART serkin_6 46 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04442 366 MobiDBLite consensus disorder prediction 328 366 - -
Arst3g04442 366 FunFam cold-responsive protein kinase 1 17 121 - -
Arst3g04442 366 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04442 Arst-Chr3 119740060 119744405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04442 34 354 Receptor kinase-like Gene Family AT1G56120 53.374 1.11e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst3g04442 Pkinase 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04442 - - gmx:100775344 635.95