Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04437 ATGGACACTAGCAGGGCTGAAGGGAAGAGAACCTTGCTGAGGTACAAAGAGGAGGAGGAGGAGGAGGACGACGAGGAGACTGAGGAGGAAGAGGAAGAAGACACGGGGGGTTATGGAGAAGAATATGGTGGTGGTGGGAGGAGGAAGAGGGCAATGACAGATCTCATGAGCAGCAAGAGAGGCTTCAAAGGTGGAGGAGGTTCGTCAATGCCACCGTCATGTCAGGTGGACGGCTGTGACTCTGATCTGAGCAAGGGAAAGCAGTATCATCGAAGACATAAGGTTTGTGAGAACCATGCCAAGGCTCCTTCCGTACACATTTCAGGACAACAACAAAGGTTTTGCCAACAATGCAGCAGATTTCATGAGCTTTCGGAGTTTGATGACTCAAAACGAAGCTGTAGGAGACGTTTGGCGGGGCATAATGAAAGGCGTCGCAAAAATGCAACTGAGTACCATGGAGAATGA 468 0.5021 MDTSRAEGKRTLLRYKEEEEEEDDEETEEEEEEDTGGYGEEYGGGGRRKRAMTDLMSSKRGFKGGGGSSMPPSCQVDGCDSDLSKGKQYHRRHKVCENHAKAPSVHISGQQQRFCQQCSRFHELSEFDDSKRSCRRRLAGHNERRRKNATEYHGE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04437 155 MobiDBLite consensus disorder prediction 1 17 - -
Arst3g04437 155 ProSiteProfiles Zinc finger SBP-type profile. 71 148 IPR004333 GO:0003677
Arst3g04437 155 PIRSF SBP 1 155 IPR017238 GO:0003677|GO:0003700|GO:0009908
Arst3g04437 155 MobiDBLite consensus disorder prediction 1 85 - -
Arst3g04437 155 FunFam Squamosa promoter-binding-like protein 14 65 135 - -
Arst3g04437 155 MobiDBLite consensus disorder prediction 127 155 - -
Arst3g04437 155 Coils Coil 12 35 - -
Arst3g04437 155 MobiDBLite consensus disorder prediction 18 38 - -
Arst3g04437 155 SUPERFAMILY SBT domain 72 152 IPR036893 GO:0003677|GO:0005634
Arst3g04437 155 Gene3D - 64 135 IPR036893 GO:0003677|GO:0005634
Arst3g04437 155 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 27 149 IPR044817 GO:0003677
Arst3g04437 155 Pfam SBP domain 74 147 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04437 Arst-Chr3 119699795 119701606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04437 65 151 SBP-box Gene Family AT2G33810 70.115 8.09e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Arst3g04437 SBP 2.8e-34 No_clan