Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04436 ATGGACACTAGCAGGGCTGAAGGGAAGAGAACCTTGCTGAGGTACAAAGAGGAGGAGGAGGAGGAGGACGACGAGGAGACTGAGGAGGAAGAGGAAGAAGACACGGGGGGTTATGGAGAAGAATATGGTGGTGGTGGGAGGAGGAAGAGGGCAATGACAGATCTCATGAGCAGCAAGAGAGGCTTCAAAGGTGGAGGAGGTTCGTCAATGCCACCGTCATGTCAGGTGGACGGCTGTGACTCTGATCTGAGCAAGGGAAAGCAGTATCATCGAAGACATAAGGTTTGTGAGAACCATGCCAAGGCTCCTTCCGTACACATTTCAGGACAACAACAAAGGTTTTGCCAACAATGCAGCAGGCTTAGAGGGAAAGAAGACCCTCTCTTTGTTGAATTTCATGAGCTTTCGGAGTTTGATGACTCAAAACGAAGCTGTAGGAGACGTTTGGCGGGGCATAATGAAAGGCGTCGCAAAAATGCAACTGAGTACCATGGAGAATGA 501 0.499 MDTSRAEGKRTLLRYKEEEEEEDDEETEEEEEEDTGGYGEEYGGGGRRKRAMTDLMSSKRGFKGGGGSSMPPSCQVDGCDSDLSKGKQYHRRHKVCENHAKAPSVHISGQQQRFCQQCSRLRGKEDPLFVEFHELSEFDDSKRSCRRRLAGHNERRRKNATEYHGE 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04436 166 Gene3D - 64 146 IPR036893 GO:0003677|GO:0005634
Arst3g04436 166 MobiDBLite consensus disorder prediction 146 166 - -
Arst3g04436 166 Coils Coil 12 35 - -
Arst3g04436 166 MobiDBLite consensus disorder prediction 1 17 - -
Arst3g04436 166 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 27 160 IPR044817 GO:0003677
Arst3g04436 166 MobiDBLite consensus disorder prediction 18 38 - -
Arst3g04436 166 MobiDBLite consensus disorder prediction 1 82 - -
Arst3g04436 166 SUPERFAMILY SBT domain 72 163 IPR036893 GO:0003677|GO:0005634
Arst3g04436 166 ProSiteProfiles Zinc finger SBP-type profile. 71 159 IPR004333 GO:0003677
Arst3g04436 166 Pfam SBP domain 74 158 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04436 Arst-Chr3 119699795 119701613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04436 65 162 SBP-box Gene Family AT2G33810 62.245 2.19e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Arst3g04436 SBP 3.2e-28 No_clan