Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04406 ATGTCAAATGAAATGGCAAGTGGGACACTAAGCTCTGAATACCAAACCTTAATGAAGTCAACAACAGAAGGAAAACGAAACATGTTTATCAAAGCTTATCCACCTGTTACCCTAAAGTTTGAAGATGTTATATATGAAACCAAAACAAGTAAAAGGGGTGGCTTGTTTTGCAAGAAAGAAAATAGTTGTAATGAGGATGGTAAACTAATCTTGAAAGGGGTTAGCGGTTCTGTTTTCCCTGGAGAATTATTAGCCATTTTAGGTCCTTCTGGTAGTGGAAAAACAACTCTGATAAATGCATTGGGAGGTAGACTAAAAAATGGAATCACAAAAGGAAGCATAACCTACAATGGCAAGAAGCTCTTGAAATCCATGAAGCGAAACCTTGGATTTGTTCATCAACATGATCTCTTCTATTCTCACCTAACAGTCCATGAGACATTAGTCTTTTCGGCTCTTCTTCGCCTGCCAAACAGCCTCTCCAAACAAGAGAAAATCGCGCACGCTTGCGCGGTTATGGATGAACTTGACCTGAATCATTGTAAGGACACTATAATGGGAGGTCCACTCTTAAGAGGTGTGTCAGGTGGAGAACGGAAAAGGGTCAGCATAGGTCAAGAATTGTTGACTAATCCTAGTCTTTTGCTTGTTGATGAACCAACTTCAGGGCTTGATTCGACAACTGCTCGGAGAATCGTGCTAACTCTGTGTGATTTGGCTAAATCTGGAAGGACTGTGGTAATGACTATTCATCAACCTTCTAGCAAGCTATTTTACATGTTTCCCAAGATTCTGCTGCTATCAGATGGTAGTACCTTGTACTTTGGGAAAGGAGAACTTGTCATGAATTACTTCTACAGCATTGGTTATGCTCCTTCTGTAGCCATGAATCCTACAGATTTCCTACTTGATCTTGCAAGCGGTATATATGCTGGAAATTTAGAAGATGAAGTTGAAGCTACAAAACAAGTGTTAAAATCAGCATTTGAAAGTAACCTTGCATCTCAAGTAAACATGGAACTCAAAAGCTCCAAGGTACCATTTCACAACACTTCAGGGGATGAAATGCTTGGCCAGTACTGCACAACATGGTGGCAACAATTCACTATATTAATAAACAGAGGTTTCAAAGAAAGGAAGTATGACCAATTTTCAATCCTCATAATCTGTAAAGTTTTGGCAGCATCAACCATTTCAGGCCTTGTTTGGTGGCAGGCCGGAGCTAATCAAACGAAAGACCTGGTGGGACTACTTTTCTACTACACACAAGTTAGTGCATACTTGCCTATGTTAGTGTCAATCTACACCTTCCCTTATGATCATGAAATGTTAATGAAGGAAAAATCTTGCTACATGTATAGACTCTCAACTTATGTCATGGCAAACAGTGTTGTTGAACTTCCAGCAGTGCTAGCAATGCCAACCATTTTTGTCACCATTACTTACTGGATGGTGGGGCTAAAACCAAATCCCTTAAATTTCTTTCAAACTCTAGCCATTGTTCTTCTCTATGCTTTGGTGTCACAGGGTATTGGTCTTGCCATTGGTGCAGTTGTGGTGAGTAATCAAAAGTTGGCTTCTAGAGTTGGATCGGTAGTCATGACTTTATATATTCTAAGCAATGGCTTCTATGTTCAGCATGTCCCAAGTTTTGTGTCATGGATTAAACACATATCTCATAGCTATTATGGTTATAAGCTATTGTTGGGGTCACAGTTTAAGGATAATGTTACATGCTCAGTTAGAGAATATCAGGTGATTCAGCATGTTGGTCTTGATCATCAAATTTTCTCTGTTTTTGCCTTGGTTGCAATGGTTCTAGTGTACAGGATTATTGCCTATTTTGCTCTCATGATTGTTGTCAAACATAGCTAG 1875 0.3947 MSNEMASGTLSSEYQTLMKSTTEGKRNMFIKAYPPVTLKFEDVIYETKTSKRGGLFCKKENSCNEDGKLILKGVSGSVFPGELLAILGPSGSGKTTLINALGGRLKNGITKGSITYNGKKLLKSMKRNLGFVHQHDLFYSHLTVHETLVFSALLRLPNSLSKQEKIAHACAVMDELDLNHCKDTIMGGPLLRGVSGGERKRVSIGQELLTNPSLLLVDEPTSGLDSTTARRIVLTLCDLAKSGRTVVMTIHQPSSKLFYMFPKILLLSDGSTLYFGKGELVMNYFYSIGYAPSVAMNPTDFLLDLASGIYAGNLEDEVEATKQVLKSAFESNLASQVNMELKSSKVPFHNTSGDEMLGQYCTTWWQQFTILINRGFKERKYDQFSILIICKVLAASTISGLVWWQAGANQTKDLVGLLFYYTQVSAYLPMLVSIYTFPYDHEMLMKEKSCYMYRLSTYVMANSVVELPAVLAMPTIFVTITYWMVGLKPNPLNFFQTLAIVLLYALVSQGIGLAIGAVVVSNQKLASRVGSVVMTLYILSNGFYVQHVPSFVSWIKHISHSYYGYKLLLGSQFKDNVTCSVREYQVIQHVGLDHQIFSVFALVAMVLVYRIIAYFALMIVVKHS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04406 624 Gene3D - 59 287 IPR027417 -
Arst3g04406 624 Pfam ABC-2 type transporter 366 573 IPR013525 GO:0016020|GO:0140359
Arst3g04406 624 Pfam ABC transporter 71 222 IPR003439 GO:0005524
Arst3g04406 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 285 IPR027417 -
Arst3g04406 624 ProSitePatterns ABC transporters family signature. 194 208 IPR017871 GO:0005524|GO:0016887
Arst3g04406 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 613 - -
Arst3g04406 624 SMART AAA_5 80 271 IPR003593 GO:0016887
Arst3g04406 624 FunFam ABC transporter G family member 22 57 288 - -
Arst3g04406 624 Pfam ABC-2 type transporter 251 322 IPR043926 GO:0140359
Arst3g04406 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 294 IPR003439 GO:0005524
Arst3g04406 624 CDD ABCG_EPDR 35 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04406 Arst-Chr3 119207749 119211445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04406 70 255 Calmodulin-binding Proteins AT2G36910 30.412 1.05e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04406 K05681 - gmx:100800295 821.617