Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04403 ATGATCATGGTGGATAATAGCACAGATTCATCATCAGGAGCGGGTGATCAGCATCATCACCCTCAGCTTCCTCCAGGCTTTCGATTCCACCCCACAGACGAAGAACTCGTCGTTCACTACCTTAAAAAGAAAGCTTCTTCTTCACCACTCCCTGTCGCCATCATCGCCGACGTTGATCTCTATAAGTTCGATCCATGGGAGCTCCCAAGTAAGGCAGCGTTTGGGGATCAAGAGTGGTACTTTTTCAGTCCTCGGGATAGGAAGTACCCGAATGGAGCTCGGCCAAACAGGGCGGCTACTTCTGGGTATTGGAAAGCCACCGGGACGGATAAGCCTATTCTCTCTTCTGATGGGAACAAGCAGAAAGTTGGAGTCAAGAAAGCGCTTGTTTTTTATGGTGGCAAGCCCCCCAAAGGTGTCAAAACCAATTGGATTATGCATGAGTATAGGCTCACCGATAACAATAACAATGCTTCTTCTTCTATTTCATCTAAGCCTCCTTCTATCCCTCTTGATCCACTCAAGAAGACTTCTCTCAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAGAGCAACAGCAGTAGTAGCAGCCTTCCAATTCCAAGGCCAGCGTTTTTAATGGATGAAGAGAAGGATCTAATTTCCATGGAGAACAGCATGGTGCCAACTATGTCAATGTCAAAACCAAGAAGCACTTCAACAACAGGTTGTTATGGACCCATGGCACTTGAAAACGATGACAACTTCTTCGATGGTATATTGGCAGCATCAACCGATCATCACACCATGCAAAATGGGTCTCCAGGGTCCTCATCTTCAAGCAAGAGATTCCATGGTGATCTTAATAATGGAGACAACACCTCCTTCGTTTCTCTTCTTAACCAGCTTCCTCACAACACACCGTTTCACCCAAACTCCATTCTTGGCTCCGTGGGAGACGCTGTCTTGAGGCAACAATTTCAACTTCCAGGCTTAAATTGGAACTAA 993 0.4612 MIMVDNSTDSSSGAGDQHHHPQLPPGFRFHPTDEELVVHYLKKKASSSPLPVAIIADVDLYKFDPWELPSKAAFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGNKQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDNNNNASSSISSKPPSIPLDPLKKTSLRLDDWVLCRIYKKSNSSSSSLPIPRPAFLMDEEKDLISMENSMVPTMSMSKPRSTSTTGCYGPMALENDDNFFDGILAASTDHHTMQNGSPGSSSSSKRFHGDLNNGDNTSFVSLLNQLPHNTPFHPNSILGSVGDAVLRQQFQLPGLNWN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04403 330 ProSiteProfiles NAC domain profile. 23 192 IPR003441 GO:0003677|GO:0006355
Arst3g04403 330 FunFam NAC transcription factor 56 32 197 - -
Arst3g04403 330 MobiDBLite consensus disorder prediction 1 17 - -
Arst3g04403 330 Gene3D NAC domain 32 197 IPR036093 GO:0003677|GO:0006355
Arst3g04403 330 Pfam No apical meristem (NAM) protein 24 151 IPR003441 GO:0003677|GO:0006355
Arst3g04403 330 PANTHER NAC TRANSCRIPTION FACTOR 56 23 227 - -
Arst3g04403 330 MobiDBLite consensus disorder prediction 261 282 - -
Arst3g04403 330 SUPERFAMILY NAC domain 19 192 IPR036093 GO:0003677|GO:0006355
Arst3g04403 330 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04403 Arst-Chr3 119198316 119199797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04403 4 330 NAC Transcription Factor Family AT1G61110 56.977 2.39e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g04403 NAM 2.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04403 - - gmx:100792372 397.127