Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04402 ATGGATAATGTTGTTACATTATTGTTAAAGTTAAAGCTGAGAAGCTTGTATAGTATAATGTTGTTACTTTATTATGTGTTGTGCTTAAGGGGTGTTATTGTGTCCTCTAGACCTCATGAGAATGAGAGAAAAGTAACAACGATTATGAATAACAATAATAATAATAATGGTGATGTTGTGAGAGGCTTACCTGGCCAGCCTGCTGTGGATTTTGAGCACTATGCTGGCTATGTTACTGTGAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTTTGAGGCCATTACCAACCCAGATGATAAGCCTTTGGTCCTATGGCTTAATGGAGGACCTGGATGTTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGTCCATTTTTAGTGGACTCTGATGGGAAGGGACTCAAATTTAATAACTTGTCTTGGAACCAAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTACTCAAACACAACTAGTGATTATCAACAATTGGGTGATCAAATGACAGCTAATGATGCTTACACTTTTCTCCATAACTGGTTTCTCAAGTTCCCATCATATAGAACAAGGACTTTTTATATAGCAGGGGAGAGTTATGCAGGCAAGTATGTGCCGGAGCTGGCTGAACTCATCCATGATAGGAACAAGGACCCTTCCCTTCATATTAATCTCAAGGGCATTATGTTAGGAAATCCAGAAACATCTGATGCTGAGGATTGGATAGGGCTAGTAGACTATGCTTGGAGTCATGCAATCATATCGGACGAGACTCACAAAACAATAAAAACAAGTTGTGACTTCAACAGCAGTGATCCATGGCGTAACCAAGATTGCAGTGAAGCAGTAGATGAAGTCCTCAAACAATACAGAGAAATTGATATATACAGCCTCTACACCTCTACTTGCTTTGCCTCTACAGCGCGCTCTTCCATGGCGCGCTCATCATCATCTACAACAATGGTTTTCCCTAGAATGATGGGTGGTTATGACCCATGCTTGGATGACTATGCTAGAGCTTATTATAATAGACCAGATGTTCAGAAGGCCCTACATGCTGGTGATGGCCACAATCTCAAGAATTGGAGTATTTGCAACAATGATATATTCAATGGATGGGGAGATTCAAAGGCAAGTGTAGTGCCAATATACAGGAAGCTAATAGCAGGAGGAGGACTTAGGATATGGATTTACAGCGGAGACACAGATGGAAGAGTGCCAGTGCTGTCAACAAGGTATAGCTTAAGTTCTCTTGAATTGAGAGTGAGAAAGGCATGGAGGCCATGGTACCATGAGAATGAGGTGAGTGGGTGGGTAGAAGAATATGAAGGGCTAACATTTGCTACTTTCAGAGGAGCTGGCCACGCTGTTCCATGTTTCAAACCAAGTAGCTCTCTCGCCTTCTTCTCTTCCTTCCTTCGTGGACAATCCCCTCCTTCTACTAAATAA 1473 0.4189 MDNVVTLLLKLKLRSLYSIMLLLYYVLCLRGVIVSSRPHENERKVTTIMNNNNNNNGDVVRGLPGQPAVDFEHYAGYVTVNETNGRALFYWFFEAITNPDDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDSDGKGLKFNNLSWNQEANMLFLESPVGVGFSYSNTTSDYQQLGDQMTANDAYTFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNKDPSLHINLKGIMLGNPETSDAEDWIGLVDYAWSHAIISDETHKTIKTSCDFNSSDPWRNQDCSEAVDEVLKQYREIDIYSLYTSTCFASTARSSMARSSSSTTMVFPRMMGGYDPCLDDYARAYYNRPDVQKALHAGDGHNLKNWSICNNDIFNGWGDSKASVVPIYRKLIAGGGLRIWIYSGDTDGRVPVLSTRYSLSSLELRVRKAWRPWYHENEVSGWVEEYEGLTFATFRGAGHAVPCFKPSSSLAFFSSFLRGQSPPSTK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04402 490 FunFam Carboxypeptidase 54 313 - -
Arst3g04402 490 Pfam Serine carboxypeptidase 65 483 IPR001563 GO:0004185|GO:0006508
Arst3g04402 490 FunFam Carboxypeptidase 338 485 - -
Arst3g04402 490 FunFam Carboxypeptidase 388 483 - -
Arst3g04402 490 SUPERFAMILY alpha/beta-Hydrolases 56 485 IPR029058 -
Arst3g04402 490 Gene3D - 341 379 - -
Arst3g04402 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
Arst3g04402 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 163 IPR001563 GO:0004185|GO:0006508
Arst3g04402 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 189 214 IPR001563 GO:0004185|GO:0006508
Arst3g04402 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 152 IPR001563 GO:0004185|GO:0006508
Arst3g04402 490 ProSitePatterns Serine carboxypeptidases, serine active site. 203 210 IPR018202 GO:0004185
Arst3g04402 490 Gene3D alpha/beta hydrolase 55 313 IPR029058 -
Arst3g04402 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 61 470 IPR001563 GO:0004185|GO:0006508
Arst3g04402 490 Gene3D - 388 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04402 Arst-Chr3 119190396 119192907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04402 346 484 Calmodulin-binding Proteins AT2G22960 33.571 4.38e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04402 K16297 - gmx:100815993 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04402 3 119190396 119192907 Arst10g00411 10 3348151 3352080 PCT