Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04381 ATGCGATGTGCATTGTTTGGGGACTATGTTAATCAAGTAAATCATTTTCTTACCTCTGGCTATGTGGAGCAGCCTGTTGTAGTGATTCAACTTGCTAAAGTCAAGTTCTTTAGAGGTCAAGTAGGCCTTCAAAATGTGATGTATGCCACTCAAATATTATTTAATCCTGATCTTCCTGAAGTTGTTGAATTCAGGCAGAGTATGGTTGAGCAAGGTGTCAATGGTACCCAGCCATTGTTTATTGCAAATGAGGGTAAAGTTGTCTCCTTGGAAGATGATTTCATGCGTTTAACTAGAAAATGCACTGTTGAAGAGCTTCAAGATAACAATGAGGAGGGTTCTTTTATCATTTTTGGTACAATCCAAGGTATTGTTGAGGATGGAGATTGGTGGTATTCTGCTTGTGTGTGTGAAAAGGGTATCTATCCTCAAAATGGTGCATATTACTGTGATTTTTGTTTGAAGCACATAACTAATGTGACTCCAAGATTTAAATTTAAAATAACAGTTGAAGATCATAGTGGGGAGGGTATTTTTCTTCTCTTTGATCGTGAGGCATCTTATTTGCTTAAAAAATCATGTGCTGATTTGTTTACCGAGGTTCAAATATATGCAAGTCTTGTATGTGGGGATACTTATCCTTCCTTATTCCAAGGGCTCATTGGAAAGAAGTTACTGCTGAAGGTTGATACCAAAGGTGTGCCACATGATACATTTTATGGCACTTTCCGAGTTAGGAGAATATGTGATGATCCCACCATTATTGCCATGTTTGAGCTTCCCGATTATGATGCTGATGATGAGTCTACTCCAAAAAAGGAGGCTGATTTACACAAATCTGTTCCCTATGGAGAAGGGGATATTGGTGTTAAGAAGAATTCATCAAAGAATTTGATCAAAAGTGAGAAAGTTACTGATGAGAAAACACCCAGCAATGATACTGTTAGTGATGATCTTTCTGCTGAACTAGATATATTGCTTAGCTCACCAGAAAAAGAAACTCAGGAGGTGTTGTCCCACGTTATTGATGCACCTTCCAAATATAGAGAGAAGCTTATTCATGAAAATGATGTTGTCACCTTCAAGGGCAAAAGGAATCTGAATCCCCAATTTGAAGAGGCGGCTGCTGATGTAGATGGGCGTGGGTTCAAGATTGCCAAGGTTAATGGAGTTTGA 1176 0.3861 MRCALFGDYVNQVNHFLTSGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQILFNPDLPEVVEFRQSMVEQGVNGTQPLFIANEGKVVSLEDDFMRLTRKCTVEELQDNNEEGSFIIFGTIQGIVEDGDWWYSACVCEKGIYPQNGAYYCDFCLKHITNVTPRFKFKITVEDHSGEGIFLLFDREASYLLKKSCADLFTEVQIYASLVCGDTYPSLFQGLIGKKLLLKVDTKGVPHDTFYGTFRVRRICDDPTIIAMFELPDYDADDESTPKKEADLHKSVPYGEGDIGVKKNSSKNLIKSEKVTDEKTPSNDTVSDDLSAELDILLSSPEKETQEVLSHVIDAPSKYREKLIHENDVVTFKGKRNLNPQFEEAAADVDGRGFKIAKVNGV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04381 391 CDD RPA1_DBD_C 103 246 IPR047192 -
Arst3g04381 391 SUPERFAMILY Nucleic acid-binding proteins 101 250 IPR012340 -
Arst3g04381 391 SUPERFAMILY Nucleic acid-binding proteins 1 68 IPR012340 -
Arst3g04381 391 Gene3D - 91 253 IPR012340 -
Arst3g04381 391 CDD RPA1_DBD_B_like 1 68 - -
Arst3g04381 391 Gene3D - 1 77 IPR012340 -
Arst3g04381 391 Pfam Replication factor-A C terminal domain 116 199 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04381 Arst-Chr3 119073244 119082253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04381 4 197 Core DNA Replication Machinery Family AT5G08020 24.878 3.34e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04381 - - adu:107480592 795.038