Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04377 ATGAGCATTCTTACAATGCGATGTGCATTGTTTGGGGACTATGTTAATCAAGTAAATCATTTTCTTACCTCTGGCTATGTGGAGCAGCCTGTTGTAGTGATTCAACTTGCTAAAGTCAAGTTCTTTAGAGGTCAAGTAGGCCTTCAAAATGTGATGTATGCCACTCAAATATTATTTAATCCTGATCTTCCTGAAGTTGTTGAATTCAGGCAGAGTATGGTTGAGCAAGGTGTCAATGGTACCCAGCCATTGTTTATTGCAAATGAGGGTAAAGTTGTCTCCTTGGAAGATGATTTCATGCGTTTAACTAGAAAATGCACTGTTGAAGAGCTTCAAGATAACAATGAGGAGGGTTCTTTTATCATTTTTGGTACAATCCAAGGTATTGTTGAGGATGGAGATTGGTGGTATTCTGCTTGTGTGTGTGAAAAGGGTATCTATCCTCAAAATGGTGCATATTACTGTGATTTTTGTTTGAAGCACATAACTAATGTGACTCCAAGATTTAAATTTAAAATAACAGTTGAAGATCATAGTGGGGAGGGTATTTTTCTTCTCTTTGATCGTGAGGCATCTTATTTGCTTAAAAAATCATGTGCTGATTTGTTTACCGAGGTTCAAATATATGCAAGTCTTGTATGTGGGGATACTTATCCTTCCTTATTCCAAGGGCTCATTGGAAAGAAGTTACTGCTGAAGGTTGATACCAAAGGTGTGCCACATGATACATTTTATGGCACTTTCCGAGTTAGGAGAATATGTGATGATCCCACCATTATTGCCATGTTTGAGCTTCCCGATTATGATGCTGATGATGAGTCTACTCCAAAAAAGGAGGCTGATTTACACAAATCTGTTCCCTATGGAGAAGGGGATATTGGTGTTAAGAAGAATTCATCAAAGAATTTGATCAAAAGTGAGAAAGTTACTGATGAGAAAACACCCAGCAATGATACTGTTAGTGATGATCTTTCTGCTGAACTAGATATATTGCTTAGCTCACCAGAAAAAGAAACTCAGGAGGTGTTGTCCCACGTTATTGATGCACCTTCCAAATATAGAGAGAAGCTTATTCATGAAAATGATGTTGTCACCTTCAAGGGCAAAAGGAATCTGAATCCCCAATTTGAAGAGGCGGCTGCTGATGTAGATGGGCGTGGGTTCAAGATTGCCAAGGTTAATGGAGTTTGA 1191 0.3854 MSILTMRCALFGDYVNQVNHFLTSGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQILFNPDLPEVVEFRQSMVEQGVNGTQPLFIANEGKVVSLEDDFMRLTRKCTVEELQDNNEEGSFIIFGTIQGIVEDGDWWYSACVCEKGIYPQNGAYYCDFCLKHITNVTPRFKFKITVEDHSGEGIFLLFDREASYLLKKSCADLFTEVQIYASLVCGDTYPSLFQGLIGKKLLLKVDTKGVPHDTFYGTFRVRRICDDPTIIAMFELPDYDADDESTPKKEADLHKSVPYGEGDIGVKKNSSKNLIKSEKVTDEKTPSNDTVSDDLSAELDILLSSPEKETQEVLSHVIDAPSKYREKLIHENDVVTFKGKRNLNPQFEEAAADVDGRGFKIAKVNGV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04377 396 SUPERFAMILY Nucleic acid-binding proteins 5 73 IPR012340 -
Arst3g04377 396 Gene3D - 96 258 IPR012340 -
Arst3g04377 396 Pfam Replication factor-A C terminal domain 121 204 IPR013955 -
Arst3g04377 396 SUPERFAMILY Nucleic acid-binding proteins 106 255 IPR012340 -
Arst3g04377 396 CDD RPA1_DBD_C 108 251 IPR047192 -
Arst3g04377 396 CDD RPA1_DBD_B_like 5 73 - -
Arst3g04377 396 Gene3D - 1 82 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04377 Arst-Chr3 119073244 119082253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04377 5 202 Core DNA Replication Machinery Family AT5G08020 24.880 1.68e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04377 - - adu:107480592 803.512