LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g04371	ATGGCTTGTGCAAATTTGGCATTGCATTTTCGAATTCTCATCATGTCAGTGATGATTTTTGCAGCTACTTTCTGTGTTGGAGACACTGACGCCCTTGATGTTGCAGCAATCAATAGCTTATATGTAGCACTAGGATCACCTCCCCTTCAAGGGTGGAAACCTACAGGAGGAGATCCATGTGTGGAACAGTGGCAAGGTGTCAGCTGTGTCTTCTCCAATATAACTGCTTTACAACTTGGAAGCATGAATTTGAGTGGACAGCTTGGAAGTAATTTGGATTTTCGATCCATCATAGAAATGGATATTAGCAACAACAGCATTGGAGGGACCATTCCATCCACTCTGCCATCTACTCTGAAGAGATTGTCTCTTTCGGAGAATAAGTTAAATGGAAGCATTCCAGATGCCTTATCCATATTAACTCAACTAACAGAATTGAATCTGTCAGGGAACAACTTGAGTGGTCACCTACCTCCCTCGATTGCGAATTTATCATCTCTTACTACATTACACTTGCAGGACAATCAACTTGGTGGAACCCTTTTTGTTTTGGAGGACCTCCCTCTTCAGAATCTGAATATAGAGAACAATCTATTCTCTGGGCCGATTCCTCCAAAGTTGTTGACTATTCCTGAATTCAGAAAAGATGGGAATCCCTTTAATACTACTATTATTCCCTCACCTCCAGCTGCAGCTCCTTCACCTGAAGCCATGGTTCCTTCTCCTTCCCCTACTCCTTCCACTGAAAAGTCACCTGGTAAAGCGGCAAAAAGTCCCTCAACGACCATGAAAGCTCCAACACCTTTGATCACTAGGAGTTCCTTTGAAGTTAAGAACATGGTTTGGTGGATTGCTGGTTTTGGGATCTTAATATTTATTGCGTTAGGAATTTGCCTTTTTATGTGCTGGTACTGTAAGAGAAAACCAAGGAGCAAGAATCATGAGGAACATAAAGACATGGATGTTTATATTGATGAAGAGAAAGGACAGGGCTCAAAACTTCCACCGCTGCAGCAAGCACCGCCACATCCTCTCCCAATAATTTCTGGAGAGAATTTCATCAGTCCAGCTAAATCCACCAAAGTAATTGAAGGTGGAAAACAAATTATAACTAGTTCCATCAGGGTTTATTCTGTTGCATTGCTTCAGCAGTATACAGATAGTTTTTCACAAGAAAATTATATAGGAGAAGGCACACTTGGCCCTGTTTATAAGGGTGAGCTCCCTGATGGAAAGTTGCTGGCTGTGAGGAAGCTGAATGCTTCCATGGTGCAAAATCATGAGCAGTTTCTTCAATTAGTATTCAGTATCTCCAAAATTCAACATCCTAACATTGTAAAACTTTTAGGCTACTGCGCGGAGCATAGCCAACGACTACTTGTGTATGAGTATTGCAGCAATGGAACCCTTCATGATGCATTGCATACTGATGATAACACTCGTGTTAAACTTTCATGGAACGAAAGAATCCAGGTGTCACTCGGAGCTGCTAGAGCTTTACAGTATCTGCATGAGAACTTCCAGCCACCTGTTGTGCAGCGAAATTTTCGATCTTCTAACATTCACCTGAATGACAAGATGGAAGTGTGTGTCTCTGACTGTGGATTAGGTTCTTTGCTATCTTCAGAGCAGGTCGTGACGGCTCAGGGCTATGATGCTCCAGAGTTTGAATCAGGGAGTTATACAGAAAAGAGTGATGTATTCAGTTTTGGAGTTGTGATGCTAGAACTCCTAACCGGGCGAAAAGCCTTTGACAGGTGGCGGCCTCGGGGAGAGCAATCTGTGGTGAGATGGGCAGTGCCTCAGCTGCATGACATTGATGCATTGTCTGAAATGGTAGATCCCTCCTTGAATGGAAGCTACCCTCCTCCTCCTATGAAATCCTTGTCACGTTTTGCTGATGTTATTTCTTCATGTTTACAGCATGAACCTGAATTCCGACCAGCAATGTCTGAAATCGTTCAGGATCTCTTGCGAATCACGTCAAGTCTTGGATGA	1998	0.4299	MACANLALHFRILIMSVMIFAATFCVGDTDALDVAAINSLYVALGSPPLQGWKPTGGDPCVEQWQGVSCVFSNITALQLGSMNLSGQLGSNLDFRSIIEMDISNNSIGGTIPSTLPSTLKRLSLSENKLNGSIPDALSILTQLTELNLSGNNLSGHLPPSIANLSSLTTLHLQDNQLGGTLFVLEDLPLQNLNIENNLFSGPIPPKLLTIPEFRKDGNPFNTTIIPSPPAAAPSPEAMVPSPSPTPSTEKSPGKAAKSPSTTMKAPTPLITRSSFEVKNMVWWIAGFGILIFIALGICLFMCWYCKRKPRSKNHEEHKDMDVYIDEEKGQGSKLPPLQQAPPHPLPIISGENFISPAKSTKVIEGGKQIITSSIRVYSVALLQQYTDSFSQENYIGEGTLGPVYKGELPDGKLLAVRKLNASMVQNHEQFLQLVFSISKIQHPNIVKLLGYCAEHSQRLLVYEYCSNGTLHDALHTDDNTRVKLSWNERIQVSLGAARALQYLHENFQPPVVQRNFRSSNIHLNDKMEVCVSDCGLGSLLSSEQVVTAQGYDAPEFESGSYTEKSDVFSFGVVMLELLTGRKAFDRWRPRGEQSVVRWAVPQLHDIDALSEMVDPSLNGSYPPPPMKSLSRFADVISSCLQHEPEFRPAMSEIVQDLLRITSSLG	665

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g04371	665	MobiDBLite	consensus disorder prediction	226	247	-	-
	Arst3g04371	665	Pfam	Protein tyrosine and serine/threonine kinase	392	657	IPR001245	GO:0004672\|GO:0006468
	Arst3g04371	665	Gene3D	Ribonuclease Inhibitor	33	229	IPR032675	-
	Arst3g04371	665	Gene3D	Transferase(Phosphotransferase) domain 1	465	664	-	-
	Arst3g04371	665	Gene3D	Phosphorylase Kinase; domain 1	354	464	-	-
	Arst3g04371	665	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	465	664	-	-
	Arst3g04371	665	MobiDBLite	consensus disorder prediction	219	266	-	-
	Arst3g04371	665	MobiDBLite	consensus disorder prediction	248	266	-	-
	Arst3g04371	665	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 3	30	152	-	-
	Arst3g04371	665	SUPERFAMILY	L domain-like	33	207	-	-
	Arst3g04371	665	Pfam	Leucine rich repeat	99	153	IPR001611	GO:0005515
	Arst3g04371	665	SUPERFAMILY	Protein kinase-like (PK-like)	370	657	IPR011009	-
	Arst3g04371	665	FunFam	Protein STRUBBELIG-RECEPTOR FAMILY 8	355	464	-	-
	Arst3g04371	665	Pfam	Leucine rich repeat N-terminal domain	33	69	IPR013210	-
	Arst3g04371	665	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	18	661	IPR046959	-
	Arst3g04371	665	ProSiteProfiles	Protein kinase domain profile.	389	658	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g04371	Arst-Chr3	119056640	119060834	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g04371	12	652	Strubbelig Receptor Gene Family	AT1G53730	39.914	2.53e-147	443

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Arst3g04371		PK_Tyr_Ser-Thr	1.3e-37	CL0016