Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04342 ATGTTGTTGGATCCTGGTGGAGTTGAATGTAATGGATGTGCAAAGGAACATCATATGTCATCAACCCGGCCATGGTCTCAGTCTTTTTCCGCTACTTTATCTGAAAGACTTAGAGACATCTCCACAAATAATTGGAATCAGTTAGCTGGATCAGGTCCTGTACCATGGAAGCAAGCACCCAGCCTATATAATTCTGTTTCTTCATCCAACCTGCAGCCAGGTGTGGCCTCTCTAGTTGAATTGACACATAAACTTGGCAAAATTTATGGAAATGAAAGATTGCCTGCTTTTTCTCTGGGAAAGAAAAATGAAAATTTTCCTGGAATATCCAACTGGAACACTAAGCTTGCATCACAGGAGATAATGCTTGTGAATGGAGCAATGAATGAGGACCAACCTAGTTCATGTTTAAATATTTGCCAGCAGTCTTCTTCTGTAAAGGAGGATTCATCTCCGCAACCTTTTGCATTGCCTGTACCTTATGCATCTCCAAATGAAAGAAATGGTCAAACTGGGGGGAATCAACTACAACAAACCCCTCCAGCTCCTCTAGGAAAGCAATATAGTGGCACTGTTCATTTATCACTTGACACATCAGGTGAAACACAAGTTCGTAATGGACGGCCTCGAGTAGATGCACGAGGAAGAAGCCAGTTACTCCCACGGTACTGGCCCAGATGTACCGATCAGGAGCTACAGCAAATATCTATCGATTCTAATTCTGTCATTACCCCGTTGTTTCAAAAAACCTTGAGCGCTAGTGATGCTGGGCGAATTGGGCGTCTAGTGCTTCCAAAGAAATGTGCTGAGGCTTATTTCCCTCCAATTTCACAGCCTGAAGGGTTGCCACTCAAAATCCTTGATGCAAAAGGCAAAGAGTGGATATTTCAGTTTCGTTTCTGGCCCAACAATAACAGTAGAATGTATGTTTTGGAAGGTGTCACTCCCTGCATACAGTCCATGCAGTTGCAAGCAGGTGACACAGTAACATTTAGCCGGCTGGAGCCAGAAGGGAAGTTGGTTATGGGATTTCGAAAGGCTTCAACTGCTACCCAATCTGATCAGGACAATGAAGCAAATAAGACCGGAAATGTACACTCCACAATTGGTGAAGTTGAAATGGCTGATCCTAGTTCATGGTCTAAAGTTGATAAATCAGGATACATTGCAAAAGAAGCACTTGGGAGCAAATCTTCAATCTCTAGAAAGAGAAAGAGCAGCATCTTAGGTTCAAAGAGTAAACGTTTAAAAATTGAAAATGAGGATTTGATAGAACTCAAGATTACTTGGCAAGAGGCTCAAGGCCTGCTAAGGCCTCCTCCTGACCATGTCCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGATGCTCCAGTGCTGGGTAAACCAACCATTTTCACCACTAGTAATGAAGGTGAAAAGATCCAGTGGGCTCAATGTGAAAATTGTCAAAAGTGGCGCAAATTGCCAGCAAGTGCAATTCTTCCCTCAAAATGGACGTGCTCTGACAATTCATGGGACCCAGAAAGATCCTCTTGCTCAGTGGCACAAGAGCTGACTGCAGAAGAGCTCGAGAATTTGCTACCTTCTTGTAATTCAGTTATTTCAAAGAAAATGAAGGCCACTAAGCAAGAGACAGATAATGTTGATGCTATGGAAGGACTTGATACACTTGCGAACCTAGCTATCTTGGGGGAGGATGAGTCACTCCCTACGTCTACCCAGGTTACAACGAAACACCCCCGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAACCTCCCAGTGGGAAGGGCCCTAAGCATAAGCAGACATGCACATGTACTGTCTGCTCGACCGTGAAACGTCGATTCCTTACCCTACAACAGAAGCGTGAGAAGAAACAAACAGAAAAGGCAGAGACAATACGGAAAAAGCAGCAGCCTCCTCCCCCCGGACAATCATCTGAAATAGTGATTGAAGACGACTCGTTGCCTTGTAGTAATGCAGGAGATAGCAGCCCAAACCCAAACAAGGATGGAAATGGCGGTTCAGATGACGATCCTAACCGGATAAAATCATCTACCTTACCATTCAAAGGTCAAATCGACCTCAATATCCAGCCCGAGCGAGAGGAAGAGTTGTCGCCGCAATCAGACTCTGGTGGCATGAAGGCACTGCTTGATGGCACAGAAAGACATCTCAGGCAGCTGAGTATTTTGAACTCCGGGGATGCAGATTCTTCAGGTAGCCAGTCAAAGGGAGTCGGAGATGAAACAAGGGAACAAAAACTCAGCAATGGTGTAGTCCTCGGAAATAATAGTCACAATTCTGATAGGGAGCTTGTGCAGCCTTTGACTATGAATGTGTGA 2367 0.4457 MLLDPGGVECNGCAKEHHMSSTRPWSQSFSATLSERLRDISTNNWNQLAGSGPVPWKQAPSLYNSVSSSNLQPGVASLVELTHKLGKIYGNERLPAFSLGKKNENFPGISNWNTKLASQEIMLVNGAMNEDQPSSCLNICQQSSSVKEDSSPQPFALPVPYASPNERNGQTGGNQLQQTPPAPLGKQYSGTVHLSLDTSGETQVRNGRPRVDARGRSQLLPRYWPRCTDQELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKASTATQSDQDNEANKTGNVHSTIGEVEMADPSSWSKVDKSGYIAKEALGSKSSISRKRKSSILGSKSKRLKIENEDLIELKITWQEAQGLLRPPPDHVPSIVVIEGFEFEEYEDAPVLGKPTIFTTSNEGEKIQWAQCENCQKWRKLPASAILPSKWTCSDNSWDPERSSCSVAQELTAEELENLLPSCNSVISKKMKATKQETDNVDAMEGLDTLANLAILGEDESLPTSTQVTTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCTVCSTVKRRFLTLQQKREKKQTEKAETIRKKQQPPPPGQSSEIVIEDDSLPCSNAGDSSPNPNKDGNGGSDDDPNRIKSSTLPFKGQIDLNIQPEREEELSPQSDSGGMKALLDGTERHLRQLSILNSGDADSSGSQSKGVGDETREQKLSNGVVLGNNSHNSDRELVQPLTMNV 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04342 788 ProSiteProfiles B3 DNA-binding domain profile. 247 348 IPR003340 GO:0003677
Arst3g04342 788 MobiDBLite consensus disorder prediction 164 189 - -
Arst3g04342 788 MobiDBLite consensus disorder prediction 627 788 - -
Arst3g04342 788 Gene3D - 479 533 - -
Arst3g04342 788 FunFam B3 domain-containing transcription repressor VAL1 225 352 - -
Arst3g04342 788 MobiDBLite consensus disorder prediction 627 643 - -
Arst3g04342 788 SUPERFAMILY DNA-binding pseudobarrel domain 244 346 IPR015300 -
Arst3g04342 788 Gene3D - 225 352 IPR015300 -
Arst3g04342 788 Pfam CW-type Zinc Finger 480 522 IPR011124 GO:0008270
Arst3g04342 788 MobiDBLite consensus disorder prediction 665 700 - -
Arst3g04342 788 MobiDBLite consensus disorder prediction 764 788 - -
Arst3g04342 788 MobiDBLite consensus disorder prediction 142 189 - -
Arst3g04342 788 Pfam B3 DNA binding domain 247 346 IPR003340 GO:0003677
Arst3g04342 788 CDD B3_DNA 245 346 IPR003340 GO:0003677
Arst3g04342 788 ProSiteProfiles Zinc finger CW-type profile. 475 525 IPR011124 GO:0008270
Arst3g04342 788 MobiDBLite consensus disorder prediction 734 754 - -
Arst3g04342 788 SMART B3_2 247 348 IPR003340 GO:0003677
Arst3g04342 788 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 2 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04342 Arst-Chr3 118832790 118841704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04342 202 633 B3 DNA Binding Superfamily AT4G32010 57.273 8.41e-165 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst3g04342 B3 6.5e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04342 K09287 - gmx:100807252 1190.25