Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04341 ATGGCTTCTGCTGCTGCTTCCGTGTCTTCTTCCTCCTTGCCGTCGTCCGGGTTCTGCTACAACCCTGAATGTAAAGAATTGAAGTCTCAAATACCTAAGAAAGGTTGGAGACTCCGTTCCGGAGACCGAGCTGAACTTTGTGATCGATGCGGCTCTGCTTTTGAAGAAGGAAGATTTTGCGAGACTTTTCATTTGAACACTTCTGGTTGGAGGAACTGTGAGACTTGTAGGAAGCGGATTCATTGTGGATGTATTGTCTCAGATAACTCGTTTATGTTGTTGGATCCTGGTGGAGTTGAATGTAATGGATGTGCAAAGGAACATCATATGTCATCAACCCGGCCATGGTCTCAGTCTTTTTCCGCTACTTTATCTGAAAGACTTAGAGACATCTCCACAAATAATTGGAATCAGTTAGCTGGATCAGGTCCTGTACCATGGAAGCAAGCACCCAGCCTATATAATTCTGTTTCTTCATCCAACCTGCAGCCAGGTGTGGCCTCTCTAGTTGAATTGACACATAAACTTGGCAAAATTTATGGAAATGAAAGATTGCCTGCTTTTTCTCTGGGAAAGAAAAATGAAAATTTTCCTGGAATATCCAACTGGAACACTAAGCTTGCATCACAGGAGATAATGCTTGTGAATGGAGCAATGAATGAGGACCAACCTAGTTCATGTTTAAATATTTGCCAGCAGTCTTCTTCTGTAAAGGAGGATTCATCTCCGCAACCTTTTGCATTGCCTGTACCTTATGCATCTCCAAATGAAAGAAATGGTCAAACTGGGGGGAATCAACTACAACAAACCCCTCCAGCTCCTCTAGGAAAGCAATATAGTGGCACTGTTCATTTATCACTTGACACATCAGGTGAAACACAAGTTCGTAATGGACGGCCTCGAGTAGATGCACGAGGAAGAAGCCAGTTACTCCCACGGTACTGGCCCAGATGTACCGATCAGGAGCTACAGCAAATATCTATCGATTCTAATTCTGTCATTACCCCGTTGTTTCAAAAAACCTTGAGCGCTAGTGATGCTGGGCGAATTGGGCGTCTAGTGCTTCCAAAGAAATGTGCTGAGCCTGAAGGGTTGCCACTCAAAATCCTTGATGCAAAAGGCAAAGAGTGGATATTTCAGTTTCGTTTCTGGCCCAACAATAACAGTAGAATGTATGTTTTGGAAGGTGTCACTCCCTGCATACAGTCCATGCAGTTGCAAGCAGGTGACACAGTAACATTTAGCCGGCTGGAGCCAGAAGGGAAGTTGGTTATGGGATTTCGAAAGGCTTCAACTGCTACCCAATCTGATCAGGACAATGAAGCAAATAAGACCGGAAATGTACACTCCACAATTGGTGAAGTTGAAATGGCTGATCCTAGTTCATGGTCTAAAGTTGATAAATCAGGATACATTGCAAAAGAAGCACTTGGGAGCAAATCTTCAATCTCTAGAAAGAGAAAGAGCAGCATCTTAGGTTCAAAGAGTAAACGTTTAAAAATTGAAAATGAGGATTTGATAGAACTCAAGATTACTTGGCAAGAGGCTCAAGGCCTGCTAAGGCCTCCTCCTGACCATGTCCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGATGCTCCAGTGCTGGGTAAACCAACCATTTTCACCACTAGTAATGAAGGTGAAAAGATCCAGTGGGCTCAATGTGAAAATTGTCAAAAGTGGCGCAAATTGCCAGCAAGTGCAATTCTTCCCTCAAAATGGACGTGCTCTGACAATTCATGGGACCCAGAAAGATCCTCTTGCTCAGTGGCACAAGAGCTGACTGCAGAAGAGCTCGAGAATTTGCTACCTTCTTGTAATTCAGTTATTTCAAAGAAAATGAAGGCCACTAAGCAAGAGACAGATAATGTTGATGCTATGGAAGGACTTGATACACTTGCGAACCTAGCTATCTTGGGGGAGGATGAGTCACTCCCTACGTCTACCCAGGTTACAACGAAACACCCCCGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAACCTCCCAGTGGGAAGGGCCCTAAGCATAAGCAGACATGCACATGTACTGTCTGCTCGACCGTGAAACGTCGATTCCTTACCCTACAACAGAAGCGTGAGAAGAAACAAACAGAAAAGGCAGAGACAATACGGAAAAAGCAGCAGCCTCCTCCCCCCGGACAATCATCTGAAATAGTGATTGAAGACGACTCGTTGCCTTGTAGTAATGCAGGAGATAGCAGCCCAAACCCAAACAAGGATGGAAATGGCGGTTCAGATGACGATCCTAACCGGATAAAATCATCTACCTTACCATTCAAAGGTCAAATCGACCTCAATATCCAGCCCGAGCGAGAGGAAGAGTTGTCGCCGCAATCAGACTCTGGTGGCATGAAGGCACTGCTTGATGGCACAGAAAGACATCTCAGGCAGCTGAGTATTTTGAACTCCGGGGATGCAGATTCTTCAGGTAGCCAGTCAAAGGGAGTCGGAGATGAAACAAGGGAACAAAAACTCAGCAATGGTGTAGTCCTCGGAAATAATAGTCACAATTCTGATAGGGAGCTTGTGCAGCCTTTGACTATGAATGTGTGA 2616 0.4476 MASAAASVSSSSLPSSGFCYNPECKELKSQIPKKGWRLRSGDRAELCDRCGSAFEEGRFCETFHLNTSGWRNCETCRKRIHCGCIVSDNSFMLLDPGGVECNGCAKEHHMSSTRPWSQSFSATLSERLRDISTNNWNQLAGSGPVPWKQAPSLYNSVSSSNLQPGVASLVELTHKLGKIYGNERLPAFSLGKKNENFPGISNWNTKLASQEIMLVNGAMNEDQPSSCLNICQQSSSVKEDSSPQPFALPVPYASPNERNGQTGGNQLQQTPPAPLGKQYSGTVHLSLDTSGETQVRNGRPRVDARGRSQLLPRYWPRCTDQELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAEPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKASTATQSDQDNEANKTGNVHSTIGEVEMADPSSWSKVDKSGYIAKEALGSKSSISRKRKSSILGSKSKRLKIENEDLIELKITWQEAQGLLRPPPDHVPSIVVIEGFEFEEYEDAPVLGKPTIFTTSNEGEKIQWAQCENCQKWRKLPASAILPSKWTCSDNSWDPERSSCSVAQELTAEELENLLPSCNSVISKKMKATKQETDNVDAMEGLDTLANLAILGEDESLPTSTQVTTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCTVCSTVKRRFLTLQQKREKKQTEKAETIRKKQQPPPPGQSSEIVIEDDSLPCSNAGDSSPNPNKDGNGGSDDDPNRIKSSTLPFKGQIDLNIQPEREEELSPQSDSGGMKALLDGTERHLRQLSILNSGDADSSGSQSKGVGDETREQKLSNGVVLGNNSHNSDRELVQPLTMNV 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04341 871 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 18 828 - -
Arst3g04341 871 MobiDBLite consensus disorder prediction 847 871 - -
Arst3g04341 871 ProSiteProfiles B3 DNA-binding domain profile. 338 431 IPR003340 GO:0003677
Arst3g04341 871 MobiDBLite consensus disorder prediction 748 783 - -
Arst3g04341 871 MobiDBLite consensus disorder prediction 255 280 - -
Arst3g04341 871 MobiDBLite consensus disorder prediction 710 726 - -
Arst3g04341 871 SUPERFAMILY DNA-binding pseudobarrel domain 335 429 IPR015300 -
Arst3g04341 871 Gene3D - 316 435 IPR015300 -
Arst3g04341 871 MobiDBLite consensus disorder prediction 710 871 - -
Arst3g04341 871 ProSiteProfiles Zinc finger CW-type profile. 558 608 IPR011124 GO:0008270
Arst3g04341 871 MobiDBLite consensus disorder prediction 817 837 - -
Arst3g04341 871 SMART B3_2 338 431 IPR003340 GO:0003677
Arst3g04341 871 Pfam CW-type Zinc Finger 563 605 IPR011124 GO:0008270
Arst3g04341 871 Gene3D - 562 616 - -
Arst3g04341 871 MobiDBLite consensus disorder prediction 233 280 - -
Arst3g04341 871 Pfam B3 DNA binding domain 338 429 IPR003340 GO:0003677
Arst3g04341 871 CDD B3_DNA 336 429 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04341 Arst-Chr3 118832568 118841704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04341 33 716 B3 DNA Binding Superfamily AT4G32010 42.917 1.41e-164 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst3g04341 B3 1.1e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04341 K09287 - gmx:100807252 1308.51