Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04317 ATGGGAAGAACACCTTGCTGTGAGAAGAATGGGCTGAAGAAAGGGCCATGGACGCCAGAGGAGGATCAGAAGCTCGTTGATTACATTCACAAACATGGCTACGGCAATTGGAGAACACTCCCTAAGAATGCCGGGTTGCAAAGATGCGGAAAGAGTTGCCGTCTGCGGTGGACAAACTATCTCCGGCCAGATATAAAGCGAGGTCGATTCTCCTTGGAAGAGGAGGAGACCATAATACACCTTCACAGCATTCTTGGAAACAAGTGGTCTGCAATAGCGTCGCGGCTGCCGGGGAGGACAGACAACGAAATAAAGAATTATTGGAATACACACATTAGGAAGAGGCTACTGAGGATGGGAATCGATCCTGTGACACACAGTCCACGCCTAGACCTTCTTGATCTCTCATCTCTCTTTGGTTCATCAATATCACACATCAACAATAACATGCAACACCATCTTAACCCTGAGCTTCTCAAATTGGCCACGTCACTCTTCTCTCATAATAATAATAATAATAATAATAATAATTCTCTTGACAACAGCCACAACCAAATCATCAGTAGTGATGTTTCCTTGTCTTTCCCTCAAGCAAACTTTCTAGAATCCAATAATAATGTCGACTCACCATACCCATCAAATCTACTGCACCATGACCTAATGAATACTAGTGATTATTGGCACGCCGATAATAATAATAATATTGGAATTGCTTCAACTTCTAGCCCTTGTTATGTCACTGACCAATTACCAACAAGTTATTATTATAACAATAATAGTAACAACTACTACTCTCATCATGCAAGTCTTGTGGACCCACCTATGTCTGAAACGTCAACCTTTCATTCCAATAATAGCAGCAGTAATACTTATGTCAATGGAAACAACAGTAGCACCGAGGATGAGAGAGAAAGCTATGTCAGCACCAATAACAGCGTCTTGAGATTTGAAATCCCAGATATGTTGGATGTCAATGCATTCGTGTAA 987 0.4174 MGRTPCCEKNGLKKGPWTPEEDQKLVDYIHKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSLEEEETIIHLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSLFGSSISHINNNMQHHLNPELLKLATSLFSHNNNNNNNNNSLDNSHNQIISSDVSLSFPQANFLESNNNVDSPYPSNLLHHDLMNTSDYWHADNNNNIGIASTSSPCYVTDQLPTSYYYNNNSNNYYSHHASLVDPPMSETSTFHSNNSSSNTYVNGNNSSTEDERESYVSTNNSVLRFEIPDMLDVNAFV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04317 328 Gene3D - 69 116 - -
Arst3g04317 328 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst3g04317 328 MobiDBLite consensus disorder prediction 275 304 - -
Arst3g04317 328 CDD SANT 69 112 IPR001005 -
Arst3g04317 328 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Arst3g04317 328 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst3g04317 328 CDD SANT 16 61 IPR001005 -
Arst3g04317 328 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst3g04317 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 272 - -
Arst3g04317 328 Gene3D - 13 66 - -
Arst3g04317 328 FunFam MYB-related transcription factor 13 66 - -
Arst3g04317 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Arst3g04317 328 FunFam Transcription factor MYB39 69 130 - -
Arst3g04317 328 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst3g04317 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Arst3g04317 328 SMART sant 13 63 IPR001005 -
Arst3g04317 328 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04317 Arst-Chr3 118512661 118514104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04317 1 328 MYB Transcription Factor Family AT4G21440 53.134 9.14e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g04317 Myb_DNA-binding 8.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04317 K09422 - qsa:O6P43_012553 342.043