Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04315 ATGGGAAAAAAATCAGCTGCGGCCACCGGGGAGGAGGAGGATGTTCCGCCGGACAACCTGAGGTGCGGGAGGACGGACGGGCGGCAATGGCGGTGCCGGCGGAGAGTGAAGGATAATCTGAAGCTGTGCGAGGTTCACTACCTTCAAGGTCGCCATCGCCAGTACAAGGAGAAGGTCCCTGAGTCCCTCAAGCTTCAGAGGAATAAGCGTAAGAGCCACTCTCCTCCTCCTTCTCCTCCTTCCTCTCCTGCCAACAATGTCGAAATTAGGGCACGCAAGGACTCCAAGATTGCTCTTCTCCCCAAAAAGAAGCGCAAGCTTTCCGATGGTACTTCAGAGGCATTGGTCGTTCAGAAGAAGAATAAGAACAAGAAAAGGAAAAACAAAAACAAGGGGTTGCGGAGTGGTGATGATAAGCATTTGGAGCTTATAAGGATGGTCTTGACGAGAGAGGTTGAGAAAAGGAAGAAGAGGAACAAGAAGAATGACGATGATGAAGAAGATGAAGAGTGCAGCGAAGGAGGAGAGTTGCGGAGAGAATTGCCGAATGGAATGATGGCTATCTCTACAGCTTCAACCGCCAATGGTTTCAATGGCAATGTGGGTTCCCATTTTGATGTAAAAGTGGCTGCTGATTCTAATTCCAAAGCGTTCGCCGTCACGCCGCGTTACTTCAGGTCCAAGAATGAGCAGAAGCTTCTAATTTTTCAGGTTGTGCAGTATGGACAGGGCTTGAAGAAGAAGGGAAAGGGTAAGAAGAAGAGGTGTCATTGGTGCCAGAAGAGTAATTCTCAGAATCTTATCAAGTGTTCTAGCTGTAACAAGGAGTTCTTCTGCATGGATTGCATAAAACAGCGGTATTTTGGCACTGAGAATGAAGTTAAGAAGGCATGCCCTGTTTGTAGAGGAACTTGCACTTGTAAGGACTGTTTGGCAAGTCAATATAAAGACAGTGAAAGTAAGGAACATTCGGCTGATAAAAGCAGAGTTGGTAGAATATTGCATTTACATTACCTACTCTGTATGCTCCTTCCAGTACTGAAACAAATAAGTGAATATCAGGATACTCAGCTAGAAACTGAAGCAAGAATTAAAGGGATAGAAGCTTCTGATATTCACATCAGGCAGGTTGAATTTGGCTTCAATGAGAAAATTTTCTGCAATCACTGCAAAACTCCCATTTTGGATCTCAATAGAAGCTGCCCTAGTTGCTTATATAGCCTTTGCTTAAATTGTTTTCAAGAATTAAGTCAGGGAAGCATTTCTGGAGAATCAATGTTGAAGCTACCGATTAAAACAAAAACTTGCGCTGCCCGTGAGAAAGAAAATGCGGATGAGAAGGCCATTTCTAGTTGCAATATAACTCATTGTAATGGCATTGACAATGTATCATTTCCATCTACAGAACTTGGTGGTTGTGGTCATAGCCACCGTGATTTGAGATATATTTTTCCCTCTAGTTTGATCAAAGAGATGGAACTAAAGGCAGAAGAAATCGTTTGCAGTTATGAATTGCCAGAAACACCAGACAAAAGTTCAAAATGCTCAATGTGTTCTGACACAGATCACAAAACTAAAAGACATAAGCAGTTGCAAGAAGCAGCTTTAAGAGGGGATTCAAATGATAATTGCTTGTTTAACCCCACAGTTTCGGACATCAATGGTGATAATTTTGAACACTTTCAAAAACACTGGGGAAAAGGCCATCCCGTAGTGGTGCAAGATGTTCTTCGAAAGACATCAAACCTCAGCTGGGATCCACTGATCATGTTCTGTAGTTATCTTGAGCGGAGCATTACAAGATACGAGAGTGATAAGGACTTACTTGAATCTTGTTTGGATTGGTGTGAGGTGGAAATTAACATTAGGCAGTCTTTTAGCGGGTCTCTCAAATGTCGTCCTTGCGAAAACACTTGCCATGAGATGCTGAAATTAAAGGGGTTGTTGTCTTCCCAACTTTTCAAAGAGCAATTTCCAGGTCATTTTTCTGAAGTAATTGATGCTCTACCAATTCAAGAATACATGAATCCTATGTCTGGTCTTCTGAATTTGGCAGCAAGTTTGCCACTTCAGAGTACCAAACATGACATTGGACCATACGTGCATATTTCATATGGCTGTGCCGACAAGGAAGCTGATTCTGTGACTAAACTCTGCTATGATTCATATGATGTGGTTAATATTATGGCACATACCACGGATGTTCCCCTATCTACAGAGCAGCTTTCAAAAATTCGACGACTACTGAAAAAGCATAAAGCTTTGTGTCGAAGGGATTCTTCTAAAATTACTGCTGAACAACAACAGGAAGAGAAAGTAAAAGAAACGTTACCACCACATGTTGAAGAAGTGGAACAAAAAGGTTCACAGCGAGTGGCCAAAGAAGTTGACTTTTTAAGGAGAGTCAATAGAACATCCTTTGTCTCAACTCACACTGAAAAAGCAACTACTGGAAGTATAGAGAACAGCTTTTCCCAGGATAGAGAATGTGATTTATCTGATTCCGATTCGGAACCCACAGTTCTCCATGGGTTGTCTACAGGTCGTAATCCAAGAAATCTGTTTGAAAGCTCGAAAGATAAAAATAAGTTATCTGCTGAGCATTCTGGGGCCCAATGGGATGTATTCCGCAGACAAGACGTTCCAAAGCTCATGGAATACCTTATAAGACATTGTGATGAATTTACTCATAACTATGACAATGACAAAGTGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACAAAAATCACAAAATAAGGCTTAAAGAGGAGTTTCAGGTTGAACCATGGACATTCAAGCAACATGTTGGAGAAGCCGTTGTCATTCCCGCTGGATGTCCATACCAGATCAGAAATCCTAAGTGTTGCGTTCATGTGGTGTTGGAATTTGTGTCACCGGAAAATGTCTCCGAGTGTATCCAGCTGATTGATGAGGTCCGACTGCTGCCGGCAGACCATAAAGCCAAAGTAGAAACTTTGCAGGTAAAGAAAATGGTGCTTCATAGCATGAATACAGCAATTAAGGAAATGCATGAGCTTACAAACAAGCCAGCCAAAACATGA 3072 0.4222 MGKKSAAATGEEEDVPPDNLRCGRTDGRQWRCRRRVKDNLKLCEVHYLQGRHRQYKEKVPESLKLQRNKRKSHSPPPSPPSSPANNVEIRARKDSKIALLPKKKRKLSDGTSEALVVQKKNKNKKRKNKNKGLRSGDDKHLELIRMVLTREVEKRKKRNKKNDDDEEDEECSEGGELRRELPNGMMAISTASTANGFNGNVGSHFDVKVAADSNSKAFAVTPRYFRSKNEQKLLIFQVVQYGQGLKKKGKGKKKRCHWCQKSNSQNLIKCSSCNKEFFCMDCIKQRYFGTENEVKKACPVCRGTCTCKDCLASQYKDSESKEHSADKSRVGRILHLHYLLCMLLPVLKQISEYQDTQLETEARIKGIEASDIHIRQVEFGFNEKIFCNHCKTPILDLNRSCPSCLYSLCLNCFQELSQGSISGESMLKLPIKTKTCAAREKENADEKAISSCNITHCNGIDNVSFPSTELGGCGHSHRDLRYIFPSSLIKEMELKAEEIVCSYELPETPDKSSKCSMCSDTDHKTKRHKQLQEAALRGDSNDNCLFNPTVSDINGDNFEHFQKHWGKGHPVVVQDVLRKTSNLSWDPLIMFCSYLERSITRYESDKDLLESCLDWCEVEINIRQSFSGSLKCRPCENTCHEMLKLKGLLSSQLFKEQFPGHFSEVIDALPIQEYMNPMSGLLNLAASLPLQSTKHDIGPYVHISYGCADKEADSVTKLCYDSYDVVNIMAHTTDVPLSTEQLSKIRRLLKKHKALCRRDSSKITAEQQQEEKVKETLPPHVEEVEQKGSQRVAKEVDFLRRVNRTSFVSTHTEKATTGSIENSFSQDRECDLSDSDSEPTVLHGLSTGRNPRNLFESSKDKNKLSAEHSGAQWDVFRRQDVPKLMEYLIRHCDEFTHNYDNDKVMVHPILDQSIFLDKNHKIRLKEEFQVEPWTFKQHVGEAVVIPAGCPYQIRNPKCCVHVVLEFVSPENVSECIQLIDEVRLLPADHKAKVETLQVKKMVLHSMNTAIKEMHELTNKPAKT 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04315 1023 MobiDBLite consensus disorder prediction 89 110 - -
Arst3g04315 1023 ProSiteProfiles Zinc finger RING-type profile. 256 302 IPR001841 -
Arst3g04315 1023 MobiDBLite consensus disorder prediction 153 181 - -
Arst3g04315 1023 MobiDBLite consensus disorder prediction 1 27 - -
Arst3g04315 1023 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 1019 IPR045109 GO:0032454|GO:0033169
Arst3g04315 1023 MobiDBLite consensus disorder prediction 53 140 - -
Arst3g04315 1023 MobiDBLite consensus disorder prediction 53 68 - -
Arst3g04315 1023 Pfam JmjC domain, hydroxylase 869 964 IPR003347 -
Arst3g04315 1023 ProSiteProfiles WRC domain profile. 16 62 IPR014977 -
Arst3g04315 1023 MobiDBLite consensus disorder prediction 839 853 - -
Arst3g04315 1023 ProSiteProfiles JmjC domain profile. 677 983 IPR003347 -
Arst3g04315 1023 Gene3D Cupin 549 992 - -
Arst3g04315 1023 SUPERFAMILY Clavaminate synthase-like 557 1005 - -
Arst3g04315 1023 Pfam WRC 17 58 IPR014977 -
Arst3g04315 1023 MobiDBLite consensus disorder prediction 812 863 - -
Arst3g04315 1023 SMART cupin_9 658 983 IPR003347 -
Arst3g04315 1023 MobiDBLite consensus disorder prediction 812 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04315 Arst-Chr3 118491435 118496333 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Arst3g04315 JmjC 1.5e-08 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04315 K15601 - gmx:100787798 1249.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04315 3 118491435 118496333 Arst10g00462 10 3746605 3752580 PCT