Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04310 ATGTCAGCTGACACAGAATCTGGAGATGGTTCTCACAACACAGCTAAGGTTGTTGGGATTATAGTTGGCGGTGCAGCTCTTATACTTTTGGCACTGGCTATCTGTTTCTTGTTATGGAAGAAAAGGAAATTCCCATGCATGTTGGAGAGGGAGACAGTGCACCGAGGTTCTCTGGAAAGGAGTCAGGATTTGTTGATGACTGAAGTGGTCTTTTCAAGCAACAGAGAACAGTCTAGTGAAAGGAAAATTGATGACTTAGAGTTGCCATTGTTTGATTTTAATACCTTAACAATGGCTACAAAGAACTTCTCTGAAGAGAATAAACTTGGACAAGGAGGATTTGGTGTTGTTTACAAAGGCAGGTTGATGGAAGGCCAGGAAATCGCAGTGAAGAGGTTATCAAAAAATTCTGGTCAAGGAGTTGAAGAGTTTAAGAATGAGGTCAAGCTGATTGTCAAACTTCAACACCGGAATCTTGTTCGGCTGCTTGGTTGCAGCATTCAAATGGATGAAAAGATGCTTGTGTATGAGTACTTGGAAAATAGAAGCCTTGATGGGATTTTATTTGACAAGGCAAAAAGCTCCTCATTGGATTGGCCAAGGCGCTTCAGCATTATTTGTGGTATTGCTAGAGGACTTCTTTATTTGCACCATGATTCCAGATTTAAGATTATCCATAGAGATCTCAAGGCAAGCAACATTCTACTTGACAAAGAAATGAATCCAAAAATATCAGATTTTGGAATGGCTAGAATTTTTAGCACAAATCAAACAGAAGCTAATACAATGAGAGTTGTTGGTACATATGGTTACATGTCTCCTGAATATGCTATGGATGGGATCTTCTCAGTAAAATCTGATGTTTTTAGTTTTGGGGTATTAGTGTTGGAGATCATAACTGGAAAAAAGAATAGAGGATTCTACTATGCAAATGCTGAACTGAATCTTCTAGGGCATGCATGGAAGCAATGGAATGAAGGAAATGCATTGGAATTAATTGATTCGTCAATTGACAATTCATATTCATCATCTGAGGTTCTTAGGTGCGTACAAGTGGGGCTCTTATGTGTGCAAGAGCGTGCAGAAGACAGGCCAACAATGTCTTCAGTGGTCTTGATGCTAAGTAGTGAAACTGCATCAATGCCGCAGCCCAAAAACCCTGGGTTTTGCCTGGGAAGGAATCCAATGGAAACTGATTCTTCTTCAAGTAAGCAAGATGAAACATTCACTGTGAACCAAGTCACAGTCACAATGCTAAATGCCAGGTAG 1269 0.4011 MSADTESGDGSHNTAKVVGIIVGGAALILLALAICFLLWKKRKFPCMLERETVHRGSLERSQDLLMTEVVFSSNREQSSERKIDDLELPLFDFNTLTMATKNFSEENKLGQGGFGVVYKGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYLENRSLDGILFDKAKSSSLDWPRRFSIICGIARGLLYLHHDSRFKIIHRDLKASNILLDKEMNPKISDFGMARIFSTNQTEANTMRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIITGKKNRGFYYANAELNLLGHAWKQWNEGNALELIDSSIDNSYSSSEVLRCVQVGLLCVQERAEDRPTMSSVVLMLSSETASMPQPKNPGFCLGRNPMETDSSSSKQDETFTVNQVTVTMLNAR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04310 422 CDD STKc_IRAK 109 374 - -
Arst3g04310 422 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Arst3g04310 422 Gene3D Transferase(Phosphotransferase) domain 1 179 386 - -
Arst3g04310 422 ProSiteProfiles Protein kinase domain profile. 103 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04310 422 SMART serkin_6 103 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04310 422 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 68 178 - -
Arst3g04310 422 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 421 - -
Arst3g04310 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Arst3g04310 422 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 179 382 - -
Arst3g04310 422 SUPERFAMILY Protein kinase-like (PK-like) 83 374 IPR011009 -
Arst3g04310 422 Pfam Domain of unknown function (DUF3403) 376 422 IPR021820 GO:0004674
Arst3g04310 422 Gene3D Phosphorylase Kinase; domain 1 76 178 - -
Arst3g04310 422 Pfam Protein tyrosine and serine/threonine kinase 106 372 IPR001245 GO:0004672|GO:0006468
Arst3g04310 422 Pfam Receptor serine/threonine kinase 59 93 IPR022126 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04310 Arst-Chr3 118414706 118422490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04310 91 422 Receptor kinase-like Gene Family AT4G11530 56.973 9.36e-138 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst3g04310 PK_Tyr_Ser-Thr 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04310 - - gmx:106799702 671.774