Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04309 ATGTCAGAATCTGGAGATGGTTCTCACAACACAGCTAAGGTTGTTGGGATTATAGTTGGCGGTGCAGCTCTTATACTTTTGGCACTGGCTATCTGTTTCTTGTTATGGAAGAAAAGGAAATTCCCATGCATGTTGGAGAGGGAGACAGTGCACCGAGGTTCTCTGGAAAGGAGTCAGGATTTGTTGATGACTGAAGTGGTCTTTTCAAGCAACAGAGAACAGTCTAGTGAAAGGAAAATTGATGACTTAGAGTTGCCATTGTTTGATTTTAATACCTTAACAATGGCTACAAAGAACTTCTCTGAAGAGAATAAACTTGGACAAGGAGGATTTGGTGTTGTTTACAAAGGCAGGTTGATGGAAGGCCAGGAAATCGCAGTGAAGAGGTTATCAAAAAATTCTGGTCAAGGAGTTGAAGAGTTTAAGAATGAGGTCAAGCTGATTGTCAAACTTCAACACCGGAATCTTGTTCGGCTGCTTGGTTGCAGCATTCAAATGGATGAAAAGATGCTTGTGTATGAGTACTTGGAAAATAGAAGCCTTGATGGGATTTTATTTGACAAGGCAAAAAGCTCCTCATTGGATTGGCCAAGGCGCTTCAGCATTATTTGTGGTATTGCTAGAGGACTTCTTTATTTGCACCATGATTCCAGATTTAAGATTATCCATAGAGATCTCAAGGCAAGCAACATTCTACTTGACAAAGAAATGAATCCAAAAATATCAGATTTTGGAATGGCTAGAATTTTTAGCACAAATCAAACAGAAGCTAATACAATGAGAGTTGTTGGTACATATGGTTACATGTCTCCTGAATATGCTATGGATGGGATCTTCTCAGTAAAATCTGATGTTTTTAGTTTTGGGGTATTAGTGTTGGAGATCATAACTGGAAAAAAGAATAGAGGATTCTACTATGCAAATGCTGAACTGAATCTTCTAGGGCATGCATGGAAGCAATGGAATGAAGGAAATGCATTGGAATTAATTGATTCGTCAATTGACAATTCATATTCATCATCTGAGGTTCTTAGGTGCGTACAAGTGGGGCTCTTATGTGTGCAAGAGCGTGCAGAAGACAGGCCAACAATGTCTTCAGTGGTCTTGATGCTAAGTAGTGAAACTGCATCAATGCCGCAGCCCAAAAACCCTGGGTTTTGCCTGGGAAGGAATCCAATGGAAACTGATTCTTCTTCAAGTAAGCAAGATGAAACATTCACTGTGAACCAAGTCACAGTCACAATGCTAAATGCCAGGTAG 1260 0.4 MSESGDGSHNTAKVVGIIVGGAALILLALAICFLLWKKRKFPCMLERETVHRGSLERSQDLLMTEVVFSSNREQSSERKIDDLELPLFDFNTLTMATKNFSEENKLGQGGFGVVYKGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYLENRSLDGILFDKAKSSSLDWPRRFSIICGIARGLLYLHHDSRFKIIHRDLKASNILLDKEMNPKISDFGMARIFSTNQTEANTMRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIITGKKNRGFYYANAELNLLGHAWKQWNEGNALELIDSSIDNSYSSSEVLRCVQVGLLCVQERAEDRPTMSSVVLMLSSETASMPQPKNPGFCLGRNPMETDSSSSKQDETFTVNQVTVTMLNAR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04309 419 SUPERFAMILY Protein kinase-like (PK-like) 80 371 IPR011009 -
Arst3g04309 419 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 418 - -
Arst3g04309 419 CDD STKc_IRAK 106 371 - -
Arst3g04309 419 Pfam Receptor serine/threonine kinase 56 90 IPR022126 GO:0004674
Arst3g04309 419 ProSitePatterns Protein kinases ATP-binding region signature. 106 128 IPR017441 GO:0005524
Arst3g04309 419 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 176 379 - -
Arst3g04309 419 Gene3D Phosphorylase Kinase; domain 1 73 175 - -
Arst3g04309 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Arst3g04309 419 Gene3D Transferase(Phosphotransferase) domain 1 176 383 - -
Arst3g04309 419 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 65 175 - -
Arst3g04309 419 Pfam Domain of unknown function (DUF3403) 373 419 IPR021820 GO:0004674
Arst3g04309 419 Pfam Protein tyrosine and serine/threonine kinase 103 369 IPR001245 GO:0004672|GO:0006468
Arst3g04309 419 SMART serkin_6 100 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04309 419 ProSiteProfiles Protein kinase domain profile. 100 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04309 Arst-Chr3 118414706 118422541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04309 88 419 Receptor kinase-like Gene Family AT4G11530 56.973 9.46e-138 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst3g04309 PK_Tyr_Ser-Thr 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04309 - - gmx:106799702 671.774