Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04307 ATGGGAAGAGCAAGAGGAAGATGTGCCACTACTCTCCTCTGTTTCTTCCTTTTTTGTTTCTCCATTTTTTCCCCAAAACCTTGTACTTCTTCAGATACCTTAACAAAATCCCAAATCCTAAGAACAAACCAAACCCTCTTGTCCCCAAAGGGAATCTTCCAACTAGGTTTCTTTTCCCCCACCGATGATGATTCCACCTCCTTGTACCTCGCCATATGGTACAACAACATTCTTCCTAGAACAGTGGTTTGGGTTGCAAACAGAGATACCCCACTTCAGAGTTCCACAGGGTTTCTCCAGATAGCTGAAACAGGATCCATCAACATAGTTAACCATTCCTTGAAATCCATATGGTCTTCAAATCAAACCACACAGCAACCTCAAAACCCAGTTCTCAAGCTCTTAGATTCAGGGAACCTTGTTCTAAGAGAATCAAACGAGAACGACGACCCATCAAAGTTTCTATGGCAGAGCTTCGATTACCCTACGGATACTCTGTTATCGGGAATGAAATTGGGTTGGAACTTAGACACAAACACGGAGAAACACCTAACTTCATGGAAGTTCCAAGACCAAGCCCCTTCAACCGGAGATTACTCTTTCAAGATGAACTTCCATGGGCTCCCTGAGATTTTCCTCTGGAACAAGGACAAGATAACATATAGAAGTGGACCATGGAACGGTGCGAGATTCAGCGGCGTGCCAGAGATGCAACCCGTAACGGATTCAATCAAATTCACGTTCCACGTTGATGAGCACCAAGTGTACTACACATTCTTCATCGGGAACGAATCGTTGTTCTCGAGACTGTTGGTGAGTTCTTCCGGAGAACTTCAGAGGCTGACTTGGATAGAGAGCACGCAGGCATGGAACAAATTCTGGTACGCACCGAAGGACCAATGCGACTATTACAGAGAGTGTGGGGCGTACGGCGTGTGCGACGCAAACGCATCGCCGGTTTGCCAGTGTGTGAAGGGGTTCAGACCGAAGAACCCGCAGGCATGGAACCTTCGGGATGGGTCGAATGGGTGTGTGAGGAAGACGGAGTTGGAGTGTGAGAGTGACGGGTTCTTGAAGATGGGGAATGTGAAGCTGCCGGAGACGACGTCAGTGTTTGTGAATCGGAGCATGGGGATCATGGAATGCGGAGAAGTGTGCCGTCGGAACTGTTCATGTACTGCTTATGCCAATATAGAGATCACCGGTGGGGGCAGCGGATGTGTCATGTGGATTGGCCCCCTCTTAGATATCAGGCGCTATCCTTCCGGTGGTCAAGATCTCTATGTCAGGTTAGCAGCTTCTGATTTGGAATCTGGAGATGGTTCTCACAACACAGCTAAGGTTGTTGGGATTATAGTTGGCGGTGCAGCTCTTATACTTTTGGCACTGGCTATCTGTTTCTTGTTATGGAAGAAAAGGAAATTCCCATGCATGTTGGAGAGGGAGACAGTGCACCGAGGTTCTCTGGAAAGGAGTCAGGATTTGTTGATGACTGAAGTGGTCTTTTCAAGCAACAGAGAACAGTCTAGTGAAAGGAAAATTGATGACTTAGAGTTGCCATTGTTTGATTTTAATACCTTAACAATGGCTACAAAGAACTTCTCTGAAGAGAATAAACTTGGACAAGGAGGATTTGGTGTTGTTTACAAAGGCAGGTTGATGGAAGGCCAGGAAATCGCAGTGAAGAGGTTATCAAAAAATTCTGGTCAAGGAGTTGAAGAGTTTAAGAATGAGGTCAAGCTGATTGTCAAACTTCAACACCGGAATCTTGTTCGGCTGCTTGGTTGCAGCATTCAAATGGATGAAAAGATGCTTGTGTATGAGTACTTGGAAAATAGAAGCCTTGATGGGATTTTATTTGACAAGGCAAAAAGCTCCTCATTGGATTGGCCAAGGCGCTTCAGCATTATTTGTGGTATTGCTAGAGGACTTCTTTATTTGCACCATGATTCCAGATTTAAGATTATCCATAGAGATCTCAAGGCAAGCAACATTCTACTTGACAAAGAAATGAATCCAAAAATATCAGATTTTGGAATGGCTAGAATTTTTAGCACAAATCAAACAGAAGCTAATACAATGAGAGTTGTTGGTACATATGGTTACATGTCTCCTGAATATGCTATGGATGGGATCTTCTCAGTAAAATCTGATGTTTTTAGTTTTGGGGTATTAGTGTTGGAGATCATAACTGGAAAAAAGAATAGAGGATTCTACTATGCAAATGCTGAACTGAATCTTCTAGGGCATGCATGGAAGCAATGGAATGAAGGAAATGCATTGGAATTAATTGATTCGTCAATTGACAATTCATATTCATCATCTGAGGTTCTTAGGTGCGTACAAGTGGGGCTCTTATGTGTGCAAGAGCGTGCAGAAGACAGGCCAACAATGTCTTCAGTGGTCTTGATGCTAAGTAGTGAAACTGCATCAATGCCGCAGCCCAAAAACCCTGGGTTTTGCCTGGGAAGGAATCCAATGGAAACTGATTCTTCTTCAAGTAAGCAAGATGAAACATTCACTGTGAACCAAGTCACAGTCACAATGCTAAATGCCAGGTAG 2562 0.4407 MGRARGRCATTLLCFFLFCFSIFSPKPCTSSDTLTKSQILRTNQTLLSPKGIFQLGFFSPTDDDSTSLYLAIWYNNILPRTVVWVANRDTPLQSSTGFLQIAETGSINIVNHSLKSIWSSNQTTQQPQNPVLKLLDSGNLVLRESNENDDPSKFLWQSFDYPTDTLLSGMKLGWNLDTNTEKHLTSWKFQDQAPSTGDYSFKMNFHGLPEIFLWNKDKITYRSGPWNGARFSGVPEMQPVTDSIKFTFHVDEHQVYYTFFIGNESLFSRLLVSSSGELQRLTWIESTQAWNKFWYAPKDQCDYYRECGAYGVCDANASPVCQCVKGFRPKNPQAWNLRDGSNGCVRKTELECESDGFLKMGNVKLPETTSVFVNRSMGIMECGEVCRRNCSCTAYANIEITGGGSGCVMWIGPLLDIRRYPSGGQDLYVRLAASDLESGDGSHNTAKVVGIIVGGAALILLALAICFLLWKKRKFPCMLERETVHRGSLERSQDLLMTEVVFSSNREQSSERKIDDLELPLFDFNTLTMATKNFSEENKLGQGGFGVVYKGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYLENRSLDGILFDKAKSSSLDWPRRFSIICGIARGLLYLHHDSRFKIIHRDLKASNILLDKEMNPKISDFGMARIFSTNQTEANTMRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIITGKKNRGFYYANAELNLLGHAWKQWNEGNALELIDSSIDNSYSSSEVLRCVQVGLLCVQERAEDRPTMSSVVLMLSSETASMPQPKNPGFCLGRNPMETDSSSSKQDETFTVNQVTVTMLNAR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04307 853 CDD PAN_AP_plant 348 432 - -
Arst3g04307 853 ProSiteProfiles PAN/Apple domain profile. 352 432 IPR003609 -
Arst3g04307 853 CDD B_lectin 37 162 IPR001480 -
Arst3g04307 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 499 609 - -
Arst3g04307 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 610 813 - -
Arst3g04307 853 Gene3D Phosphorylase Kinase; domain 1 507 609 - -
Arst3g04307 853 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 796 - -
Arst3g04307 853 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Arst3g04307 853 SMART ntp_6 352 431 IPR003609 -
Arst3g04307 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 159 - -
Arst3g04307 853 SMART blect_4 37 162 IPR001480 -
Arst3g04307 853 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Arst3g04307 853 Pfam D-mannose binding lectin 81 188 IPR001480 -
Arst3g04307 853 Pfam PAN-like domain 352 417 IPR003609 -
Arst3g04307 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Arst3g04307 853 SMART serkin_6 534 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04307 853 Pfam Protein tyrosine and serine/threonine kinase 537 803 IPR001245 GO:0004672|GO:0006468
Arst3g04307 853 PIRSF SRK 5 853 IPR024171 GO:0004674
Arst3g04307 853 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 228 IPR036426 -
Arst3g04307 853 Pfam Domain of unknown function (DUF3403) 807 853 IPR021820 GO:0004674
Arst3g04307 853 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544
Arst3g04307 853 SUPERFAMILY Protein kinase-like (PK-like) 514 805 IPR011009 -
Arst3g04307 853 Gene3D Transferase(Phosphotransferase) domain 1 610 817 - -
Arst3g04307 853 Pfam Receptor serine/threonine kinase 490 524 IPR022126 GO:0004674
Arst3g04307 853 CDD STKc_IRAK 540 805 - -
Arst3g04307 853 ProSiteProfiles Bulb-type lectin domain profile. 31 155 IPR001480 -
Arst3g04307 853 Gene3D - 28 159 IPR036426 -
Arst3g04307 853 ProSiteProfiles Protein kinase domain profile. 534 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04307 Arst-Chr3 118414706 118423857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04307 522 853 Receptor kinase-like Gene Family AT4G11530 56.973 2.14e-130 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst3g04307 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04307 - - gmx:106799702 1305.04