Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04301 ATGGCTGACGATGAGGATTTCCAAGGTGCAGCAGGGATTTGCGGTGAGAACTGGTGGAGGAGTATTGATTCAACAAGGAGTGTGTTTCCTCCTCTAACCTCATCATCACCATCTTCAACTTCACCTTGTTCCGTGGCACCACCCACCGACACTAGAACTTGGCCAAGTAGTGATGATCATCATCATTGTTTCATGGATTTGAAGGCACCGGCGTGTGATATTATTAGTAACAATAATAATAATAATTACCATATGAGTTTTCATGATGCGCAAGAGAAGCCACACAACAACAAGACTACTACTAATGAATCACAAAGTGGAAGCATGTTGATCGATTCAACCTTCCAAATGATGGGTTTTGGCTTGTCTTCACCCAATTGGGATCATCAATCTCTGTTAGAGAATAATAATTCACAAATAATCCAAAAGGATTATTGGAGCAGAAAGAACTTTGGAACCCAACAACAACAAGTTTCAAGTACCATGGATGTTTTCAAGCGCATGAACAACCAAGAATTTTCCTCATCAACTTATGGTTACCCGTCATCAACACTGATTCAAACATTATATGATCCACAGCAGCAGCCACAGCGCTCATCATCATCATCATCATCACTTTTCACCAACCGTTCCATGTCCTATTCATCATCTTCTACAGTGAATTATCATCATGCCTCCGATGAAGTGTCACTGTCACCAATCACATGGCCTAAACTCTTTTCTTCTTCTTCTTCATCATCATCTTCTTCTTTATCACTACTTCCCCCAATGGCAAAGCACCCTGACAATAACAATATTGGACTTCACTTTTCCAACAACAACACCCCTTTCTGGAACGCTTCCTCCGACGCACTTCACGACATTAGAGCAGGTGCTTTTCCTTTTGAAGAAGAAGACAACAAACCCAATTCCCCCATTATTCTACTCAACAAGCTTAAGAGCGAAGAATTGTGTGTGGACTCGGTAAAGAAAAATAATAATGTTTGCTCATCACCACCTCCATTCAAAAGGGCAAGAATTGAAACTCCACCCCCTTTACCAACTTTTAAGGTTCGGAAAGAGAAGTTAGGGGACCGAGTTACTGCTCTTCAGCAACTGGTTTCACCTTTCGGAAAGACCGACACTGCATCCGTTCTCCACGAAGCTATTGAGTACATCAAGTTTCTTCACGATCAAGTCAGCGTTTTGAGTACTCCATACATGAAGAGTGGAGCTTCCATTCAACCCAATCAGGAATGTAATGATTGGAAAGAGTCACCAGAAGTGGCAAAACGAGATTTGAGAAGCCGAGGGCTATGTTTGGTACCAATTTCAAGCACATTCCCGGTTGCTACGGAGGTGAGTGCTGATTTCTGGACGCCAACATTGTCATTCGGAGGAGCACTTCTAAGATAG 1395 0.4237 MADDEDFQGAAGICGENWWRSIDSTRSVFPPLTSSSPSSTSPCSVAPPTDTRTWPSSDDHHHCFMDLKAPACDIISNNNNNNYHMSFHDAQEKPHNNKTTTNESQSGSMLIDSTFQMMGFGLSSPNWDHQSLLENNNSQIIQKDYWSRKNFGTQQQQVSSTMDVFKRMNNQEFSSSTYGYPSSTLIQTLYDPQQQPQRSSSSSSSLFTNRSMSYSSSSTVNYHHASDEVSLSPITWPKLFSSSSSSSSSSLSLLPPMAKHPDNNNIGLHFSNNNTPFWNASSDALHDIRAGAFPFEEEDNKPNSPIILLNKLKSEELCVDSVKKNNNVCSSPPPFKRARIETPPPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKSGASIQPNQECNDWKESPEVAKRDLRSRGLCLVPISSTFPVATEVSADFWTPTLSFGGALLR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04301 464 MobiDBLite consensus disorder prediction 30 53 - -
Arst3g04301 464 FunFam Transcription factor bHLH123 family 350 412 - -
Arst3g04301 464 CDD bHLH_AtbHLH_like 346 397 IPR045239 -
Arst3g04301 464 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 405 IPR036638 GO:0046983
Arst3g04301 464 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 181 442 - -
Arst3g04301 464 MobiDBLite consensus disorder prediction 30 58 - -
Arst3g04301 464 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 389 IPR011598 GO:0046983
Arst3g04301 464 Gene3D - 350 411 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04301 Arst-Chr3 118307983 118311440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04301 5 464 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.605 2.21e-58 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04301 - - ahf:112791361 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04301 3 118307983 118311440 Arst10g00517 10 4192807 4195560 PCT