Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04300 ATGGCTGACGATGAGGATTTCCAAGGTGCAGCAGGGATTTGCGGTGAGAACTGGTGGAGGAGTATTGATTCAACAAGGAGTGTGTTTCCTCCTCTAACCTCATCATCACCATCTTCAACTTCACCTTGTTCCGTGGCACCACCCACCGACACTAGAACTTGGCCAAGTAGTGATGATCATCATCATTGTTTCATGGATTTGAAGGCACCGGCGTGTGATATTATTAGTAACAATAATAATAATAATTACCATATGAGTTTTCATGATGCGCAAGAGAAGCCACACAACAACAAGACTACTACTAATGAATCACAAAGTGGAAGCATGTTGATCGATTCAACCTTCCAAATGATGGGTTTTGGCTTGTCTTCACCCAATTGGGATCATCAATCTCTGTTAGAGAATAATAATTCACAAATAATCCAAAAGGATTATTGGAGCAGAAAGAACTTTGGAACCCAACAACAACAAGTTTCAAGTACCATGGATGTTTTCAAGCGCATGAACAACCAAGAATTTTCCTCATCAACTTATGGTTACCCGTCATCAACACTGATTCAAACATTATATGATCCACAGCAGCAGCCACAGCGCTCATCATCATCATCATCATCACTTTTCACCAACCGTTCCATGTCCTATTCATCATCTTCTACAGTGAATTATCATCATGCCTCCGATGAAGTGTCACTGTCACCAATCACATGGCCTAAACTCTTTTCTTCTTCTTCTTCATCATCATCTTCTTCTTTATCACTACTTCCCCCAATGGCAAAGCACCCTGACAATAACAATATTGGACTTCACTTTTCCAACAACAACACCCCTTTCTGGAACGCTTCCTCCGACGCACTTCACGACATTAGAGCAGGTGCTTTTCCTTTTGAAGAAGAAGACAACAAACCCAATTCCCCCATTATTCTACTCAACAAGCTTAAGAGCGAAGAATTGTGTGTGGACTCGGTAAAGAAAAATAATAATGTTTGCTCATCACCACCTCCATTCAAAAGGGCAAGAATTGAAACTCCACCCCCTTTACCAACTTTTAAGGTTCGGAAAGAGAAGTTAGGGGACCGAGTTACTGCTCTTCAGCAACTGGTTTCACCTTTCGGAAAGACCGACACTGCATCCGTTCTCCACGAAGCTATTGAGTACATCAAGTTTCTTCACGATCAAGTCAGCGTATGTTTTGAGTACTCCATACATGAAGAGTGGAGCTTCCATTCAACCCAATCAGGAATGTAA 1245 0.4169 MADDEDFQGAAGICGENWWRSIDSTRSVFPPLTSSSPSSTSPCSVAPPTDTRTWPSSDDHHHCFMDLKAPACDIISNNNNNNYHMSFHDAQEKPHNNKTTTNESQSGSMLIDSTFQMMGFGLSSPNWDHQSLLENNNSQIIQKDYWSRKNFGTQQQQVSSTMDVFKRMNNQEFSSSTYGYPSSTLIQTLYDPQQQPQRSSSSSSSLFTNRSMSYSSSSTVNYHHASDEVSLSPITWPKLFSSSSSSSSSSLSLLPPMAKHPDNNNIGLHFSNNNTPFWNASSDALHDIRAGAFPFEEEDNKPNSPIILLNKLKSEELCVDSVKKNNNVCSSPPPFKRARIETPPPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVCFEYSIHEEWSFHSTQSGM 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04300 414 MobiDBLite consensus disorder prediction 30 53 - -
Arst3g04300 414 Gene3D - 350 404 IPR036638 GO:0046983
Arst3g04300 414 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 181 395 - -
Arst3g04300 414 MobiDBLite consensus disorder prediction 30 58 - -
Arst3g04300 414 CDD bHLH_AtbHLH_like 346 395 IPR045239 -
Arst3g04300 414 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 399 IPR036638 GO:0046983
Arst3g04300 414 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 389 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04300 Arst-Chr3 118307974 118310955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04300 5 395 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 33.744 7.70e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04300 - - ahf:112791361 724.931