Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04249 ATGGCCCCTTTTGCGAATCCACTTTCATTTAACTTCACAAGCTTTAAGGATGGTAATGTTAATGTAGAAGAAGATGCTGCTGTTGTAAGAGAAGCTATCCAAATCACCTTGAACAGCATGGACCAAAACAACAACTACAGCGTTGGCCGTGTCACCAGCAAATCACTGATGCAGATTTGGGACAAGAATTCTGGTCAGCTCACTGACTTCATTACCACATTTTCCTTTGTTATTTACTCACAAGAGTCTAGTTATGGAGATGGAATGGCTTTCTTCTTGGCTGATCCAAATCTCCCACTTCTGCATCATGTTACACAAGGTGGTGGCCTTGGCCTTGTAGATGGCAACAAAGTACTGAATTCAACTCAGCATTCATTCGTCGCCGTGGAGTTTGACACCTTCCACAATCCATGGGACCCTCAAGAGGATTATGTCTCATACAAGGTTGATCTGAGAGACCACTTGCCGGAGCGCGTTATTGTTGGCTTCTCTGCTGCAACAGGGAGGTTGTTTGAGGTGAATACTCTCAAGTCTTGGTCATTCAGTTCAAGTTTGGATATTCTTGAGAATGTCAGAAATCCGATGACAGCACCGGCAGCATCACCAACTCCTAGTCCTGATTCTGAAAAGGGGAACAAGTTAAGACTGTTGGTGGGGATTGGAATTGGTGCAGCCTTGATTCTTAGTTTGTTAGTTTGTGCTTTAATATTGTGGAAGAAAAGTAGAGGGAAAAAAGAGGACTTAACTTTTGATCTGACCATGGATGATGAATTCCAAAAGGGCTCTGGACCAAAGAGGTTTGGCTACAATGAACTTCGAAGTGCAACTAACAAATTTTCAGATCCGAATAAGCTTGGTCAAGGTGGTTTTGGCAGCGTGTACAAAGGTTATCTGAAGAACTCAAACACCAATGTTGCCATCAAGAAGATTTCAAGAGAGTCTAGCCAAGGGATAAAGGAATATGCAACTGAAGTGAAGATCATTAGCCAGCTGAGACATAGAAATCTAGTACAACTCATAGGTTGGTGCCACAGGAAGAATGATCTACTCCTCATATATGAGTTCATGCCAAATGGAAGCTTAGATTCACATTTATATGGCGGAAAAAGCCTCTTGACTTGGCCAACAAGGTACAACATAGCTCTGAGCCTGGCTTCAGCATTGCTTTACCTACAAGAAGAATGGGAACAATGTGTGATTCACAGGGACATCAAACCAAGCAACATAATGTTGGATTCATGCTTCAATGCAAAGCTTGGTGATTTCGGTCTGGCAAGGCTAGTGGATCATGAGAAAGGTTCAAGAACCACGCTAATCGCAGGAACAAGAGGCTACATTGCACCAGAATATGCTACTTCAGGAAAGGCTACCAAAGAAGCTGATATATACAGCTTTGGAGTTGTGCTATTGGAGATTGCAAGTGGAAAGAAACCAATTATTGGGCTAGATTCTAACAAGGAGGACATAATAACTGTTGTTGAGTGGGTTTGGGAGCTATATGGAATGGGAAAGTTGCTTGAAGCAGTGGACCCAAAGCTATGTGGAGAATTTGATGAGAATCAAATGGAGCGCGTGCTTGGTGTTGGACTTTGGTGTGTTCATCCAGATTACAAATTCAGGCCATGCATACGGCAAGTCATCCAAGTTCTTCAATTTGAAGCTCCTTTACCAATTCTCCCAGAAAAGATGCCAGTGCCAACATATCTTCCTCCAGATATAAGAGCAATCTTTCGTTCAATTTCACCTCACTTTGCAATTGAGACAACGGAATATTGCATGGGTGACTAG 1788 0.4262 MAPFANPLSFNFTSFKDGNVNVEEDAAVVREAIQITLNSMDQNNNYSVGRVTSKSLMQIWDKNSGQLTDFITTFSFVIYSQESSYGDGMAFFLADPNLPLLHHVTQGGGLGLVDGNKVLNSTQHSFVAVEFDTFHNPWDPQEDYVSYKVDLRDHLPERVIVGFSAATGRLFEVNTLKSWSFSSSLDILENVRNPMTAPAASPTPSPDSEKGNKLRLLVGIGIGAALILSLLVCALILWKKSRGKKEDLTFDLTMDDEFQKGSGPKRFGYNELRSATNKFSDPNKLGQGGFGSVYKGYLKNSNTNVAIKKISRESSQGIKEYATEVKIISQLRHRNLVQLIGWCHRKNDLLLIYEFMPNGSLDSHLYGGKSLLTWPTRYNIALSLASALLYLQEEWEQCVIHRDIKPSNIMLDSCFNAKLGDFGLARLVDHEKGSRTTLIAGTRGYIAPEYATSGKATKEADIYSFGVVLLEIASGKKPIIGLDSNKEDIITVVEWVWELYGMGKLLEAVDPKLCGEFDENQMERVLGVGLWCVHPDYKFRPCIRQVIQVLQFEAPLPILPEKMPVPTYLPPDIRAIFRSISPHFAIETTEYCMGD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04249 595 PANTHER - 142 554 - -
Arst3g04249 595 Gene3D - 145 192 - -
Arst3g04249 595 Gene3D Phosphorylase Kinase; domain 1 264 355 - -
Arst3g04249 595 Gene3D Transferase(Phosphotransferase) domain 1 356 570 - -
Arst3g04249 595 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 185 IPR013320 -
Arst3g04249 595 Gene3D - 5 144 - -
Arst3g04249 595 SMART serkin_6 279 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04249 595 SUPERFAMILY Protein kinase-like (PK-like) 263 573 IPR011009 -
Arst3g04249 595 Pfam Protein kinase domain 282 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04249 595 FunFam Lectin-domain containing receptor kinase A4.3 356 570 - -
Arst3g04249 595 ProSiteProfiles Protein kinase domain profile. 279 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04249 595 CDD STKc_IRAK 285 551 - -
Arst3g04249 595 ProSitePatterns Protein kinases ATP-binding region signature. 285 309 IPR017441 GO:0005524
Arst3g04249 595 ProSitePatterns Legume lectins beta-chain signature. 127 133 IPR019825 -
Arst3g04249 595 Pfam Legume lectin domain 8 145 IPR001220 GO:0030246
Arst3g04249 595 FunFam L-type lectin-domain containing receptor kinase IX.1 264 355 - -
Arst3g04249 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Arst3g04249 595 CDD lectin_legume_LecRK_Arcelin_ConA 8 185 IPR001220 GO:0030246
Arst3g04249 595 ProSitePatterns Legume lectins alpha-chain signature. 155 164 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04249 Arst-Chr3 117750936 117752985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04249 3 568 Receptor kinase-like Gene Family AT5G10530 42.587 6.93e-160 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst3g04249 Pkinase 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04249 - - qsa:O6P43_012452 722.235