Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04248 ATGGCCCCTTTTGCGAATCCACTTTCATTTAACTTCACAAGCTTTAAGGATGGTAATGTTAATGTAGAAGAAGATGCTGCTGTTGTAAGAGAAGCTATCCAAATCACCTTGAACAGCATGGACCAAAACAACAACTACAGCGTTGGCCGTGTCACCAGCAAATCACTGATGCAGATTTGGGACAAGAATTCTGGTGGTGGCCTTGGCCTTGTAGATGGCAACAAAGTACTGAATTCAACTCAGCATTCATTCGTCGCCGTGGAGTTTGACACCTTCCACAATCCATGGGACCCTCAAGGTAATCATGTAGGCTTGAATTTCAACTCCATGAAATCTAATATAAGTAAGACATGGTTGGTGGATATTATGAAATGGAGAGTATATAATTGTAGCATTAAGTACAATTCAACCACTCTTAATTTAAGCGTTTCATTCACTCAGTACACTGATAATTCTTCATCAGAGGATTATGTCTCATACAAGGTTGATCTGAGAGACCACTTGCCGGAGCGCGTTATTGTTGGCTTCTCTGCTGCAACAGGGAGGTTGTTTGAGGTGAATACTCTCAAGTCTTGGTCATTCAGTTCAAGTTTGGATATTCTTGAGAATGTCAGAAATCCGATGACAGCACCGGCAGCATCACCAACTCCTAGTCCTGATTCTGAAAAGGGGAACAAGTTAAGACTGTTGGTGGGGATTGGAATTGGTGCAGCCTTGATTCTTAGTTTGTTAGTTTGTGCTTTAATATTGTGGAAGAAAAGTAGAGGGAAAAAAGAGGACTTAACTTTTGATCTGACCATGGATGATGAATTCCAAAAGGGCTCTGGACCAAAGAGGTTTGGCTACAATGAACTTCGAAGTGCAACTAACAAATTTTCAGATCCGAATAAGCTTGGTCAAGGTGGTTTTGGCAGCGTGTACAAAGGTTATCTGAAGAACTCAAACACCAATGTTGCCATCAAGAAGATTTCAAGAGAGTCTAGCCAAGGGATAAAGGAATATGCAACTGAAGTGAAGATCATTAGCCAGCTGAGACATAGAAATCTAGTACAACTCATAGGTTGGTGCCACAGGAAGAATGATCTACTCCTCATATATGAGTTCATGCCAAATGGAAGCTTAGATTCACATTTATATGGCGGAAAAAGCCTCTTGACTTGGCCAACAAGGTACAACATAGCTCTGAGCCTGGCTTCAGCATTGCTTTACCTACAAGAAGAATGGGAACAATGTGTGATTCACAGGGACATCAAACCAAGCAACATAATGTTGGATTCATGCTTCAATGCAAAGCTTGGTGATTTCGGTCTGGCAAGGCTAGTGGATCATGAGAAAGGTTCAAGAACCACGCTAATCGCAGGAACAAGAGGCTACATTGCACCAGAATATGCTACTTCAGGAAAGGCTACCAAAGAAGCTGATATATACAGCTTTGGAGTTGTGCTATTGGAGATTGCAAGTGGAAAGAAACCAATTATTGGGCTAGATTCTAACAAGGAGGACATAATAACTGTTGTTGAGTGGGTTTGGGAGCTATATGGAATGGGAAAGTTGCTTGAAGCAGTGGACCCAAAGCTATGTGGAGAATTTGATGAGAATCAAATGGAGCGCGTGCTTGGTGTTGGACTTTGGTGTGTTCATCCAGATTACAAATTCAGGCCATGCATACGGCAAGTCATCCAAGTTCTTCAATTTGAAGCTCCTTTACCAATTCTCCCAGAAAAGATGCCAGTGCCAACATATCTTCCTCCAGATATAAGAGCAATCTTTCGTTCAATTTCACCTCACTTTGCAATTGAGACAACGGAATATTGCATGGGTGACTAG 1827 0.4176 MAPFANPLSFNFTSFKDGNVNVEEDAAVVREAIQITLNSMDQNNNYSVGRVTSKSLMQIWDKNSGGGLGLVDGNKVLNSTQHSFVAVEFDTFHNPWDPQGNHVGLNFNSMKSNISKTWLVDIMKWRVYNCSIKYNSTTLNLSVSFTQYTDNSSSEDYVSYKVDLRDHLPERVIVGFSAATGRLFEVNTLKSWSFSSSLDILENVRNPMTAPAASPTPSPDSEKGNKLRLLVGIGIGAALILSLLVCALILWKKSRGKKEDLTFDLTMDDEFQKGSGPKRFGYNELRSATNKFSDPNKLGQGGFGSVYKGYLKNSNTNVAIKKISRESSQGIKEYATEVKIISQLRHRNLVQLIGWCHRKNDLLLIYEFMPNGSLDSHLYGGKSLLTWPTRYNIALSLASALLYLQEEWEQCVIHRDIKPSNIMLDSCFNAKLGDFGLARLVDHEKGSRTTLIAGTRGYIAPEYATSGKATKEADIYSFGVVLLEIASGKKPIIGLDSNKEDIITVVEWVWELYGMGKLLEAVDPKLCGEFDENQMERVLGVGLWCVHPDYKFRPCIRQVIQVLQFEAPLPILPEKMPVPTYLPPDIRAIFRSISPHFAIETTEYCMGD 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04248 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Arst3g04248 608 Pfam Protein kinase domain 295 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04248 608 Pfam Legume lectin domain 63 203 IPR001220 GO:0030246
Arst3g04248 608 SUPERFAMILY Protein kinase-like (PK-like) 276 586 IPR011009 -
Arst3g04248 608 PANTHER - 43 567 - -
Arst3g04248 608 SMART serkin_6 292 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04248 608 Gene3D - 64 201 - -
Arst3g04248 608 ProSitePatterns Protein kinases ATP-binding region signature. 298 322 IPR017441 GO:0005524
Arst3g04248 608 ProSitePatterns Legume lectins alpha-chain signature. 168 177 IPR000985 -
Arst3g04248 608 CDD STKc_IRAK 298 564 - -
Arst3g04248 608 FunFam Lectin-domain containing receptor kinase A4.3 369 583 - -
Arst3g04248 608 ProSiteProfiles Protein kinase domain profile. 292 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04248 608 FunFam L-type lectin-domain containing receptor kinase IX.1 277 368 - -
Arst3g04248 608 CDD lectin_legume_LecRK_Arcelin_ConA 8 198 IPR001220 GO:0030246
Arst3g04248 608 ProSitePatterns Legume lectins beta-chain signature. 85 91 IPR019825 -
Arst3g04248 608 Gene3D Phosphorylase Kinase; domain 1 277 368 - -
Arst3g04248 608 Gene3D Transferase(Phosphotransferase) domain 1 369 583 - -
Arst3g04248 608 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 198 IPR013320 -
Arst3g04248 608 Gene3D - 6 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04248 Arst-Chr3 117750936 117752985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04248 57 581 Receptor kinase-like Gene Family AT5G10530 49.719 6.93e-172 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst3g04248 Pkinase 6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04248 - - gmx:100780181 824.313