Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04245 ATGGCTGCTTCTGATTTCCAGTGCGTTGCATTTCTGCTTATAATAATAATTCCTGTAATTGCAAATGCTCAGACTCTATTATCTTTTAACTGCTCCAACTTCACCCAAAGTCATTGTGCTGATGAACTAACCCTGCAAGGTGATGCTAGTCACGCACAATCTTCTAACGTTATCGAACTCGCAGGAAGCAAAAACAATGCTTCAGGATTTGGAAGAGTGATAACAAAGGCAACACATCTTAAGGTAAATAATTCAAGATACGACTTCACCACAAACTTCTCCTTTCTAGTTTTCACAGAGGATCCCACCTATCCTGGAGATGGTTTGGCATTCTACATAGCAAGCCCGAAACTCCCGATCCAAGACCATATAGACGGCGGAGGCCTCGGCCTTGCCAAGGGTTACCACCATCTCCCAAGTGGTTACTCTTTTGTGGCTCTGGAGTTTGACACATTCTCAAATGCATGGGATCCAAGTGGTCCATCCCCGCATGTAGGACTAGATCTCAATTCTGTTGTTTCCAGCCTCTCTGAGACATGGTTGGTAGATTTTTCAGAGAGAAATAAAGTGTTCAATTGTAGTATTGACTACAACTCTGGAACCAAGCGTCTAGATGCTTTCTTCACTGCAAGCTCCCTCAATGGACCTGTAAAGAAGCAATTTTCGTTTCCTTTGGATCTCGATGAGTTCATACAAGATCCTGTTACTATTGGCATATCAGCTGCAGTTGCAGAAAAAAATTATACTGTGGGATATAGCTTGTTGTCATGGTCATTCAGTTCAACCTTACATGTGCCGAGTAATGCGGCCGGTTCCTTTCCTTACAAGGCACATTTGGAGAAAGCACTAGAAATAGGGATTGGTTTCTTTCTATGTTTATTTGTTTTGATATTAGTCCTACTCCTGATTTTGATACAGAGGGGAGGGAAAAGAAATCCTGAATCGGCGTTTGATCTGATGGATCATGAATTCCAAACGGGCACTGGACCACAGAGGATCAGCTATGACAGATTGGTGTGCGCAACGGATAACTTCCAAGAGGCGAAGAAACTTGGAAGAGGCGGTTTTGGTGCTGTGTATAAAGGATATTTCAAAGATACAGACTCTTTTGCTGCTGTAAAGAAGATATCAGCAGATTCAAAGCAGGGATTAAAGGAATATGCAGCTGAAGTGAAGATCATTAGCCAATTGAGACACAGGAATTTGGTGAGACTTACTGGTTGGTGTCACAAGAAGAATGACTTCGTCCTGATATATGAGTACATGCCGAATGGAAGCTTGGATTCTTTTCTTTTCCACGGAGTAGGCTTCTTGTCTTGGCAAGTAAGGTACAACATAGCTTTGGGATTGGCATCGGCATTGCTATATCTGCAAGAAGGGTGGGAAAAGTGTGTGCTTCACAGGGACATTAAATCAAGCAACATAATGTTGGACTCAGATTTCAATGCTAAACTTGGGGATTTTGGATTGGCCAGGCTTGTGGATCATGAGAAAGGTTCAAGGACCACAGTGACTGCTGGCACACTTGGTTACATGGCACCAGAATACATGAAAACAGGAAAAGTTCGAAAGGAATCTGATATATACAGTTTTGGGGTGGTTTTGTTGGAGATAGCAAGTGGCAAAAAGGTTATGCACCACATAGAATTGGAGGGTCGTGTGACTCAAGTTTCATTGGTAGAGTGGGTTTGGGAGCTGTATGGGTTGAGAAACATCACAGCAGCAGCAGATCCAAATCTATGTGTTACATTTGATGATCAACAAATGGAATGTATGCTTGTTGTTGGTCTTTGGTGTGCTCATCCAGATTGCAGATGCAGGCCCTCTGTAAGGCAAGTGATGAAAGTGCTTAACTTTGATGCTCCTTTACCCATTCTTCCAGAAAGAATGCCTCTTCTACCCTATCTCCCCTCAACCACAAATGAAGTCTTTTTAACTGCTGTTTCTTCATTCTCTGGTACCTAA 1965 0.426 MAASDFQCVAFLLIIIIPVIANAQTLLSFNCSNFTQSHCADELTLQGDASHAQSSNVIELAGSKNNASGFGRVITKATHLKVNNSRYDFTTNFSFLVFTEDPTYPGDGLAFYIASPKLPIQDHIDGGGLGLAKGYHHLPSGYSFVALEFDTFSNAWDPSGPSPHVGLDLNSVVSSLSETWLVDFSERNKVFNCSIDYNSGTKRLDAFFTASSLNGPVKKQFSFPLDLDEFIQDPVTIGISAAVAEKNYTVGYSLLSWSFSSTLHVPSNAAGSFPYKAHLEKALEIGIGFFLCLFVLILVLLLILIQRGGKRNPESAFDLMDHEFQTGTGPQRISYDRLVCATDNFQEAKKLGRGGFGAVYKGYFKDTDSFAAVKKISADSKQGLKEYAAEVKIISQLRHRNLVRLTGWCHKKNDFVLIYEYMPNGSLDSFLFHGVGFLSWQVRYNIALGLASALLYLQEGWEKCVLHRDIKSSNIMLDSDFNAKLGDFGLARLVDHEKGSRTTVTAGTLGYMAPEYMKTGKVRKESDIYSFGVVLLEIASGKKVMHHIELEGRVTQVSLVEWVWELYGLRNITAAADPNLCVTFDDQQMECMLVVGLWCAHPDCRCRPSVRQVMKVLNFDAPLPILPERMPLLPYLPSTTNEVFLTAVSSFSGT 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04245 654 SUPERFAMILY Protein kinase-like (PK-like) 329 636 IPR011009 -
Arst3g04245 654 Pfam Legume lectin domain 27 265 IPR001220 GO:0030246
Arst3g04245 654 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Arst3g04245 654 ProSitePatterns Protein kinases ATP-binding region signature. 351 375 IPR017441 GO:0005524
Arst3g04245 654 Gene3D Transferase(Phosphotransferase) domain 1 422 632 - -
Arst3g04245 654 ProSiteProfiles Protein kinase domain profile. 345 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04245 654 Pfam Protein kinase domain 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04245 654 CDD lectin_legume_LecRK_Arcelin_ConA 27 263 IPR001220 GO:0030246
Arst3g04245 654 CDD STKc_IRAK 351 618 - -
Arst3g04245 654 PANTHER - 59 621 - -
Arst3g04245 654 FunFam Lectin-domain containing receptor kinase A4.3 422 637 - -
Arst3g04245 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 269 IPR013320 -
Arst3g04245 654 FunFam L-type lectin-domain containing receptor kinase IX.1 330 421 - -
Arst3g04245 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Arst3g04245 654 Gene3D - 25 275 - -
Arst3g04245 654 SMART serkin_6 345 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04245 Arst-Chr3 117744231 117746195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04245 11 635 Receptor kinase-like Gene Family AT5G10530 43.260 4.52e-166 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst3g04245 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04245 - - cam:101492002 611.683