Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04206 ATGGGGATGCATCACAGGAAGCTTTTTTCAAGGCAGGATGCCTGCAGTGACCAGTGTTACAATGAAGACCCTTCTTGTTTGGGAAGATCGGATTGCAACGACTGCATCAAATGCTCGTCCACCCTGAATCCTCCACCACCACACAGCAACCGTCACATCCCCACCTTCTTGATCATCATAGTTCCCGTCGTATGCGCCGCCCTCTTTGCCCTCTTCTGCTACGTCATCTACGCCAAGTTCTACTCCCCCAGGAGCAGGTCAAGGACCACGTTCTTCTCGTTATCGTTTCCGTTACGGCTACAACAAGGACAGGAACGGAACGGCGACGACTTTCTGGATGACGGAGAAGGCGCCACTACGGTGGACCACCCTATCTGGTACATCCGTACAGCGGGTCTGAACAAAACCATCATCGAGGCCATCACGGTTCTGAAGTACAAGAAAGGCGAAGGGTTGGTTGAAGGAACAGAGTGCTCTGTTTGCTTGAGCGACTTTGAAGAAGACGACACCCTCAGGCTGTTACCCAAATGCAACCACGCTTTCCATCTCCCTTGTATTGACACGTGGCTCGCATCTCACACCAACTGTCCCATGTGTAGGGCTCCCATTGTTACCAACCCCAGAGCTTCTAGGCTTCCCTCCATGGACCACCCTGCTACTCTTGTTGTTGATTCCACTCCTCTTCAGATTCGTGGAGACGCTGCAACAACGGAAGAAAACAGTGGCAGTGAGATTGTGGAGAGGAATGGATCAGAGGAACAAGTTGAAGCTGATGTTGAAGCTGCAACAAGGAACGTGCAGCCAAGGAGATCAGTGTCTTTGGATTCTTCTTCTGCTGCCAAGATCAGCGCTGCTCTTGTTGCTGCTACTACTACTGTTGCATCAGTGCAAGAATCTAAAGAGAATTCAAAGAGGATTACTGCTTCTGCAAAAGGTAGTAGTTCATCATCTTCTTCTTCTTCGAGTGCGCCTAGTTCAATGAAGAGGTCACGCTCCTTCAGTGGGAAACACGTGCTATCCTGGTACGGCCGCAACCACAACCAGAACCAGAAGAAGACGAATCCTCCAGTCAGAAGCTTTTGA 1083 0.5042 MGMHHRKLFSRQDACSDQCYNEDPSCLGRSDCNDCIKCSSTLNPPPPHSNRHIPTFLIIIVPVVCAALFALFCYVIYAKFYSPRSRSRTTFFSLSFPLRLQQGQERNGDDFLDDGEGATTVDHPIWYIRTAGLNKTIIEAITVLKYKKGEGLVEGTECSVCLSDFEEDDTLRLLPKCNHAFHLPCIDTWLASHTNCPMCRAPIVTNPRASRLPSMDHPATLVVDSTPLQIRGDAATTEENSGSEIVERNGSEEQVEADVEAATRNVQPRRSVSLDSSSAAKISAALVAATTTVASVQESKENSKRITASAKGSSSSSSSSSSAPSSMKRSRSFSGKHVLSWYGRNHNQNQKKTNPPVRSF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04206 360 MobiDBLite consensus disorder prediction 341 360 - -
Arst3g04206 360 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 50 225 IPR044675 -
Arst3g04206 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 208 IPR013083 -
Arst3g04206 360 SMART ring_2 158 199 IPR001841 -
Arst3g04206 360 MobiDBLite consensus disorder prediction 297 333 - -
Arst3g04206 360 FunFam RING-H2 finger protein ATL54 133 206 - -
Arst3g04206 360 MobiDBLite consensus disorder prediction 297 360 - -
Arst3g04206 360 SUPERFAMILY RING/U-box 152 206 - -
Arst3g04206 360 Pfam Ring finger domain 157 200 IPR001841 -
Arst3g04206 360 CDD RING-H2_EL5-like 157 200 - -
Arst3g04206 360 ProSiteProfiles Zinc finger RING-type profile. 158 200 IPR001841 -
Arst3g04206 360 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04206 Arst-Chr3 117376104 117377547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04206 104 336 C3H Transcription Factor Family AT4G33565 41.949 1.48e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04206 - - aip:107631077 664.07