Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04178 ATGCTCACTATGACGCAACAGAATGTGGTTGTGCCCGCCGAGGAGACTAAAAGGGCGCAAAAGCCACCGGCTATACCGGGAGCCTACATTCCCATTCCCAGGAGGACTGTCTTGAAGACCCTTGAAATCAATGCTTGGCTTGACTCCATGAGAGCATCTTCTCCCACTCATCTCAAATCCACTCCTTCTCTCGCTCAAGACCACTCCTCTTCTTGGATTCTTAACCACCCATCGGCACTAGACATGTTTCAACAAATCATACATGCATCAAAGGGAAAGCAAATAGTCATGTTTCTCGACTATGATGGCACCTTGTCACCCATAGTCGATGACCCCGATCGTGCTTTCATGTCCGATTCAATGAGAAAGACTGTGAGGAAGCTTGCAACGTGTTTTCCTACTGCTATAGTTACGGGCAGATGCAGAGACAAGGTATATAACTTTGTTCGGTTGGCGGAACTATATTATGCTGGAAGCCATGGCATGGATATAAAAGGCCCAACAAAAACCTCCAAATATAACAAAGACACCAAGTCAGAGGCAGTTCTTTTTCAACCTGCCGCTGAATTTCTTCCTCTCATAGATGAGGTGTACCAACAGTTGGTTGAGAAAACGAAATCAACTCCTGGTGCTCGGGTGGAGAACAACAAATTTTGTGTGTCTGTCCATTTTCGTTGTGTTGACGAGAAGAAATGGAGTGAACTGGCGCAACAAGTGAGATCAGTGTTAAACAAGTACCGGAAGCTTCGTCTTAGCCAAGGGAGGAAGGTATTGGAGATTCGTCCTACTATTAAATGGGACAAAGGGAAGGCCCTCGATTTTTTGTTAGAGTCTCTTGGATTTGCCGACTGTAGTGATGTATTTCCTGTTTATATTGGAGATGATAGAACCGATGAAGATGCATTCAAGAAATTGAGAGACAGAGGACAAGGTCTTGGAATTCTTGTCTCGAAATTTCCGAAAGACACTAATGCAGCATACTCTTTACAAGAACCTAATGAGGTTATGGACTTTCTTCAACGTTTGGTGGAGTGGAAGAAAGAATCCCTGCAAGCATCTTCGTTGATGTAA 1071 0.4435 MLTMTQQNVVVPAEETKRAQKPPAIPGAYIPIPRRTVLKTLEINAWLDSMRASSPTHLKSTPSLAQDHSSSWILNHPSALDMFQQIIHASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLATCFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIKGPTKTSKYNKDTKSEAVLFQPAAEFLPLIDEVYQQLVEKTKSTPGARVENNKFCVSVHFRCVDEKKWSELAQQVRSVLNKYRKLRLSQGRKVLEIRPTIKWDKGKALDFLLESLGFADCSDVFPVYIGDDRTDEDAFKKLRDRGQGLGILVSKFPKDTNAAYSLQEPNEVMDFLQRLVEWKKESLQASSLM 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04178 356 FunFam Trehalose 6-phosphate phosphatase 95 182 - -
Arst3g04178 356 NCBIfam trehalose-phosphatase 93 343 IPR003337 GO:0003824|GO:0005992
Arst3g04178 356 Gene3D - 199 354 IPR023214 -
Arst3g04178 356 Gene3D - 95 187 IPR023214 -
Arst3g04178 356 SUPERFAMILY HAD-like 96 345 IPR036412 -
Arst3g04178 356 FunFam Trehalose 6-phosphate phosphatase 193 352 - -
Arst3g04178 356 Pfam Trehalose-phosphatase 98 332 IPR003337 GO:0003824|GO:0005992
Arst3g04178 356 CDD HAD_TPP 96 336 - -
Arst3g04178 356 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 26 351 IPR044651 GO:0004805|GO:0005992
Arst3g04178 356 NCBIfam HAD-IIB family hydrolase 97 308 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04178 Arst-Chr3 116659681 116662034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04178 80 342 Trehalose Biosynthesis Gene Families AT1G60140 25.623 6.14e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04178 K01087 - gmx:100794430 583.948