Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04149 ATGACAGGAATATCAGAAGTGTTGTATCAGCTGTACGCTAAAGCAATAGTGCTATTAGCATACATGCTCATAGAACTTGTCCTTCTTATTCAGTATCTCAAATCAGACAAACGCAGCAGCACCACAATCACCACCACCCAGTATCTCAGATTCGTTGAAGAGAAGAACCCCACAATTCTCTACACCAAGAGCATGATGCAGCAACTGGATCCTGTTGAATGCAGAGTGTGCTTGAATGAGTTCCATGAAGGTGATCAATTGAGGAACCTCAAGTGTCACCACGCTTTTCATAGGGATTGTTTGGACAAGTGGTTGCAACAATCTTTTGCTACTTGCCCTCTTTGCAGGATCAAGCTGTTACCTGATTATGTTGTTGCAAAGTATCAGAATAATCACCATAATCATTATCAGCGCAATAATACTGAGGTAGAGTATTATGAAGGCAATGATGATCAGCTTATTCTTTTTTTATCTTCACTGAGGGGTAGTAATCGTACTTTGCATAGATATCTCTGA 516 0.4031 MTGISEVLYQLYAKAIVLLAYMLIELVLLIQYLKSDKRSSTTITTTQYLRFVEEKNPTILYTKSMMQQLDPVECRVCLNEFHEGDQLRNLKCHHAFHRDCLDKWLQQSFATCPLCRIKLLPDYVVAKYQNNHHNHYQRNNTEVEYYEGNDDQLILFLSSLRGSNRTLHRYL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04149 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 121 IPR013083 -
Arst3g04149 171 SMART ring_2 74 115 IPR001841 -
Arst3g04149 171 ProSiteProfiles Zinc finger RING-type profile. 74 116 IPR001841 -
Arst3g04149 171 SUPERFAMILY RING/U-box 64 124 - -
Arst3g04149 171 CDD RING-H2 74 116 - -
Arst3g04149 171 Pfam Ring finger domain 73 116 IPR001841 -
Arst3g04149 171 PANTHER - 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04149 Arst-Chr3 116006429 116007100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04149 16 116 C3H Transcription Factor Family AT5G45290 42.453 9.86e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04149 K16282 - gmx:102669811 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04149 3 116006429 116007100 Arst3g04149 3 116006429 116007100 ECH
Arst3g04149 3 116006429 116007100 Arst10g01216 10 15502006 15502858 PCT