Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04143 ATGAATTCTCCAACTTCACACTTTGTTCCCCCAAGAAGGATGGGAGTATATGATCCAATCCACCAGATTAGTATGTGGGAAGAGAATTTCAGAAGTAATGTTAGTTTAAGTGCATCAACGCTCTTAATTGATGACGCGGAGATTAAGTTTGACAATCAGTCAGAATATGCTTCTCATGGAATACCAGGAACATCTAAACAATATGACCAAGAAGCTAACAGACTTGCTGATAAGATACAGAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTTTGCGCAAAAAGGCCTATGTACAGCAACTAGAATCATGTCGTGTGAAGCTAATGCAGTTAGAGCAAGAGGTTGATCATGCAAAACAACAGGGATTACATATTGGTGGTACTGGATTGGGTTCTAATAGTTTGGGTTTTGCTGCCTCTTTAAATTCAGGAATAACAAACTTCGAGATGGAGTATGGACGTTGGCTAGAAGAGCGGAATAGACATACCTTGGCACTTAGAAATGCTTTAAGTTCTCATATGGGTGACGTAGAACTCGGAGAACTTGTAGATGGCACAATGAACCACTATTTTAAGCTCTTTGGCATGAAATCTGCTGCTGCAAAAGCTGATGCTTTCTACGTTATGTCCGGCATGTGGAAATCATCAGCCGAACGATTTTTCTTCTGGATTGGAGGCTTTCGCCCCTCAGAAATTCTAAAGATTCTGGTCCCTAGGATTGAAACCATGACAGAGCAACAAAGATCAGACATAAGCAACCTTGGAAAATCTTGTCAGCAAGCAGAAGATGCTCTTTCACAAGGCATGGACAAACTTCAACAAATGGTTTCAGAATCTGTAGCAGCAGGACAACTTGAAGAACAAACTAACACTCCAAACATGTCTACTGCAATGGAGAGATTGGCAGCTCTAGTGAGCTTTGTGAACCAAGCTGATCATCTGCGACAGGAAACATTGCTGCAAATGTCTCGAATACTTACAAAACGGCAGGCTGCGAGGTGGCTTCTTGCCTTGGGGGAATATTTTCAACGCCTGCAAGCTTTGAGCTCTTTCTGGGCTAATCGTCCTCCCAAACCTGCTGAGTGCTTAATACCTTAG 1107 0.4273 MNSPTSHFVPPRRMGVYDPIHQISMWEENFRSNVSLSASTLLIDDAEIKFDNQSEYASHGIPGTSKQYDQEANRLADKIQRRLAQNREAARKSRLRKKAYVQQLESCRVKLMQLEQEVDHAKQQGLHIGGTGLGSNSLGFAASLNSGITNFEMEYGRWLEERNRHTLALRNALSSHMGDVELGELVDGTMNHYFKLFGMKSAAAKADAFYVMSGMWKSSAERFFFWIGGFRPSEILKILVPRIETMTEQQRSDISNLGKSCQQAEDALSQGMDKLQQMVSESVAAGQLEEQTNTPNMSTAMERLAALVSFVNQADHLRQETLLQMSRILTKRQAARWLLALGEYFQRLQALSSFWANRPPKPAECLIP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04143 368 SUPERFAMILY Leucine zipper domain 78 119 IPR046347 GO:0003700|GO:0006355
Arst3g04143 368 Gene3D - 76 127 - -
Arst3g04143 368 Pfam bZIP transcription factor 77 112 IPR004827 GO:0003700|GO:0006355
Arst3g04143 368 ProSiteProfiles DOG1 domain profile. 148 358 IPR025422 GO:0006351|GO:0043565
Arst3g04143 368 Coils Coil 97 124 - -
Arst3g04143 368 Pfam Seed dormancy control 168 240 IPR025422 GO:0006351|GO:0043565
Arst3g04143 368 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Arst3g04143 368 PANTHER TRANSCRIPTION FACTOR TGA9 3 359 - -
Arst3g04143 368 FunFam BZIP family transcription factor 77 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04143 Arst-Chr3 115849908 115853978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04143 1 363 Calmodulin-binding Proteins AT5G65210 61.789 3.50e-167 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst3g04143 DOG1 1.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04143 K14431 - gmx:100780003 520.776