Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04119 ATGGCGCCGAAGCAGAGAACAGCGAGGAAGGTGAGCCAGAACCCCGAACTGATTAGGGGAATCGGAAAGTACTCGAGGTCCAAGATGTACCACAAGAGGGGACTCTGGGCCATCAAGGCCAAAAAAGGCGGCGTTTTACCTCGCCACGATCCCAAACCTAAGCCTCAAGCACCTTCTCAGAAGCCTGCCAAATTTTATCTTGCTGATGACGTCAAAAAACCCTTTGTCAACAAGCACAAGCCCAAACCTACCAAGCTCAGGGCTAGCATTACTCCTAGAACAGTGCTGATTCTTCTAGCCGGNNNTTTAAAAATTGGTTCTAGGTGTAGTTCACTATCTTATGTATTTTTGCTTGTCCCTTCAGGCCCTTTCAAAATCAATGGAGTGCCTTTGAGACGTGTGAACCAATCCTACGTCATTGGTACATCAACCAAAGTAGATGTCTCTGGTGTTAATGTGGATAAATTTGATGACAAATATTTTGCAAAGGAAGCTAAGAAGAAGAAGAAAAAAGAAGAGGGAGAGTTCTTTGAATCAGAGAAAGAGGAGAAGAAAGTGCTGCCCCAGGAGAAGAAAGATAATCAGAAAATGGTGGACTCTGCTTTGTTAAAAGCCATTGAAAGCGTTCCAGATTTGAAGGCATATATTGGTGCTAGGTTTTCCCTCAAGCAAGGCATGAAGCCTCATGAGCTAGTTTTTTAA 702 0.4387 MAPKQRTARKVSQNPELIRGIGKYSRSKMYHKRGLWAIKAKKGGVLPRHDPKPKPQAPSQKPAKFYLADDVKKPFVNKHKPKPTKLRASITPRTVLILLAGXLKIGSRCSSLSYVFLLVPSGPFKINGVPLRRVNQSYVIGTSTKVDVSGVNVDKFDDKYFAKEAKKKKKKEEGEFFESEKEEKKVLPQEKKDNQKMVDSALLKAIESVPDLKAYIGARFSLKQGMKPHELVF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04119 233 SUPERFAMILY Translation proteins SH3-like domain 91 173 IPR008991 -
Arst3g04119 233 MobiDBLite consensus disorder prediction 41 62 - -
Arst3g04119 233 CDD KOW_RPL6 82 233 IPR041997 -
Arst3g04119 233 Coils Coil 162 182 - -
Arst3g04119 233 PANTHER 60S RIBOSOMAL PROTEIN L6 8 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Arst3g04119 233 Pfam Ribosomal protein L6, N-terminal domain 3 62 IPR005568 GO:0003735|GO:0005840|GO:0006412
Arst3g04119 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04119 Arst-Chr3 115560660 115562068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04119 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 72.766 2.59e-102 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04119 K02934 - gmx:100499766 305.064