Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04101 ATGATGGGTCCTTCTACCCTCTCTCTTGTTATGGTGCAACACTCTTCCACATCATCATCAGGTGGTTGCACAAAGAGAAAACAGAACGTGCAGCTGAGAAATCCTTTTGCTTCAGTTAGCATGGGAGAGGAGAAGCCATTTGATTTCTTACGCACTTTATTTGAGGGCGTTATAGCAGGAGGTACAGCCGGAGTCGTAGTTGAAACAGCTTTATACCCAATTGACACTATAAAAACACGTTTGCAGGCTGCTCGGGGAGGAGAAAAACTAATACTGAAGGGACTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCAGCTTTATTTGTTGGAGTTTATGAACCTCTGAAGCAGAAACTGTTGAGGATGTTTCCTGAAAACCTGAGTGCTTTTGCTCATCTGACTGCAGGTGCCATAGGGGGCATTGCTGCTTCACTGATTCGCGTTCCAACAGAGGTTGTTAAGCAACGAATGCAAACTGGACAGTTTACTTCAGCTGCTGGTGCTGTCCGCTTTATTGCTGCTAAGGAAGGTTTTAAAGGACTTTATGCTGGGTATGGATCTTTTTTATTGCGGGATTTGCCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGATTAGGATAGGTTATATGGCTGCGGCCCGAAGAAATTTGAATGATCCAGAAAATGCAATTATTGGTGCATTTGCAGGTGCACTAACTGGAGCTATAACAACTCCCCTTGATGTCATCAAGACAAGATTAATGGTTCAGGGATCTGCAAACCAATATAATGGAATCGTAGATTGTGTTCAAACAATTATCAAGGAAGAAGGACCTAGTGCACTTTTGAAGGGTGTTGGGCCTCGAGTACTATGGATAGGGATCGGTGGTTCGATATTCTTTGGTGTTCTTGAGGGTACAAAACGTTTTCTGGCTGAGAGGCGTCCTACACCTTCAGAGTCTCAGCCAGAAAAGGTTAAATAA 981 0.4383 MMGPSTLSLVMVQHSSTSSSGGCTKRKQNVQLRNPFASVSMGEEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPLKQKLLRMFPENLSAFAHLTAGAIGGIAASLIRVPTEVVKQRMQTGQFTSAAGAVRFIAAKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMAAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYNGIVDCVQTIIKEEGPSALLKGVGPRVLWIGIGGSIFFGVLEGTKRFLAERRPTPSESQPEKVK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04101 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 309 IPR018108 -
Arst3g04101 326 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 55 322 - -
Arst3g04101 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 51 123 IPR018108 -
Arst3g04101 326 SUPERFAMILY Mitochondrial carrier 54 304 IPR023395 -
Arst3g04101 326 PRINTS Mitochondrial carrier protein signature 69 83 IPR002067 GO:0055085
Arst3g04101 326 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Arst3g04101 326 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Arst3g04101 326 PRINTS Mitochondrial carrier protein signature 56 69 IPR002067 GO:0055085
Arst3g04101 326 Pfam Mitochondrial carrier protein 227 312 IPR018108 -
Arst3g04101 326 Pfam Mitochondrial carrier protein 132 213 IPR018108 -
Arst3g04101 326 Pfam Mitochondrial carrier protein 53 87 IPR018108 -
Arst3g04101 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 214 IPR018108 -
Arst3g04101 326 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 28 319 - -
Arst3g04101 326 Gene3D Mitochondrial carrier domain 51 321 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04101 Arst-Chr3 115124639 115129335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04101 130 315 Chloroplast and Mitochondria Gene Families AT1G07030 29.843 5.15e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04101 K15111 - gmx:100811130 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04101 3 115124639 115129335 Arst3g04101 3 115124639 115129335 ECH