Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04076 ATGCAACCAATGATTATGTTTCCCGGTCTGAATAAAGAGGAGGAGATGTATACTATGGTTGAGGCTTTGACTCATGTTGTTCGTGGAGAAATACCTCAAGAAGCTGCTGATGTTGCTGTGACATCTAACATGGCTTCTGTGTCTGCAACACCATCTACGTCCTCTTCATCTTATGGACTCAATTCTAATCTCAAAAGAAGTAGGGAAGATGATATACCCTTTCTTGCTTCATCCTCTGCTGCTATTCCACCAATTTCAGAGCTTGCAATCAACGGGAAAACAAGAAGCGAAAGAAGCGAAATGGGAGATGATGCAATAGTGTACGAATACAGAACAGATCTAAAGAAGAATGATGAGGAGAAGAGGAAGAACAATGAAGGGAAGAGAAAATACAGAGGAGTGAGGCAGAGGCCATGGGGGAAGTGGGCTGCAGAGATCCGAGATCCATTCAAAGCAGCAAGAGTGTGGTTAGGAACCTTCAACACTGCAGAGGCTGCTGCCATTGCTTACGACCAAGCCTCTCTCCGCTTCAGAGGCAACAAAGCCAAACTCAACTTCCCTGAAAATGTTAGGGTGAAGCAACCACCACCACCAACAGCTTTCACCATTTCTCATACTGCTTCTTCTTCTTCTTCTGGTGCATATGTGCCCCTTCCACCTTCCACTGTGGAGGCTTCACCACCCAAGTTTTATGACTTCTCCTCAGAGTTTTCAGACTTCCCCATCAGTTTATATGATCAGATGTTTGTGTCGTCTGCAATGGTTTCTCATATTCAAGCTTCTTCGGCTTCATCGCCAGCGGCATCGAATTCTTCCTCTTCTTCAGTGTTTGCTTATTCTGTAACTTCTGCTCCACAGGCAACTCCAATTCCTTCTGTTTATTCTGCTAAGCTGCCGCCATGGTCTTCTTCTGAGAGAGGGTCCAAGGGTTGA 933 0.4534 MQPMIMFPGLNKEEEMYTMVEALTHVVRGEIPQEAADVAVTSNMASVSATPSTSSSSYGLNSNLKRSREDDIPFLASSSAAIPPISELAINGKTRSERSEMGDDAIVYEYRTDLKKNDEEKRKNNEGKRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFNTAEAAAIAYDQASLRFRGNKAKLNFPENVRVKQPPPPTAFTISHTASSSSSGAYVPLPPSTVEASPPKFYDFSSEFSDFPISLYDQMFVSSAMVSHIQASSASSPAASNSSSSSVFAYSVTSAPQATPIPSVYSAKLPPWSSSERGSKG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04076 310 FunFam Ethylene-responsive transcription factor 2 129 188 - -
Arst3g04076 310 Pfam AP2 domain 130 179 IPR001471 GO:0003700|GO:0006355
Arst3g04076 310 CDD AP2 130 189 IPR001471 GO:0003700|GO:0006355
Arst3g04076 310 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Arst3g04076 310 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Arst3g04076 310 MobiDBLite consensus disorder prediction 289 310 - -
Arst3g04076 310 SUPERFAMILY DNA-binding domain 130 188 IPR016177 GO:0003677
Arst3g04076 310 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Arst3g04076 310 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Arst3g04076 310 Gene3D AP2/ERF domain 129 189 IPR036955 GO:0003700|GO:0006355
Arst3g04076 310 PANTHER DNA-BINDING DOMAIN 71 267 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04076 Arst-Chr3 114384244 114386141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04076 121 192 AP2-EREBP Transcription Factor Family AT2G33710 75.000 2.63e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst3g04076 AP2 3.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04076 - - adu:107480341 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04076 3 114384244 114386141 Arst3g04076 3 114384244 114386141 ECH
Arst3g04076 3 114384244 114386141 Arst10g02200 10 77330764 77332556 ECH