Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04062 ATGGGCTCATCAAATGCCTTTGGCTGGGCTGCAACAGATACCTCTGGTCATCTCTCTCCCTTCCATTTCTCAAGAAGGGAAAACGAAGCTGATGACGTCACTCTCAAAATCCTCTTCTGCGGGGTTTGCCATTCCGATCTGCACACAATCAAGAATGACTGGGGTTTCACTACTTACCCCGTTGTCCCTGGGCATGAAATTGTTGGTATTGTGACAAAAGTTGGAAGTAATGTGACAAAATTTAAGGAGGGGGATAGAGTTGGAGTTGGTGTAATAGTGGACTCATGTAAGGAATGTGAGTGTTGCCAGCAGGATCTGGAGAATTACTGTCCTAGAACTGTGTATACCTATAACTCTCCTTATAAAGGGACACGAACGCAGGGTGGCTACTCCGATTTCGTGGTTGTTCACCAGCGCTTTGTGCTTCGATTTCCCGACAACTTACCCCTTGATGCCGGTGCCCCTCTTCTGTGTGCTGGGATTACTGTGTATAGCCCCATGAAGTATTATGGGATGACAGAGCCCGGCAAGCATTTGGGAGTGGCCGGCCTCGGCGGCTTAGGCCACGTTGCCATCAAATTTGGCAAAGCATTTGGTCTCAAAGTTACTGTCATTAGTGGCTCTCCCAACAAGGAAGCTGAGGCCATTCACACTCTAGGGGCTGATTCTTTCCTTCTTTCCTCTGATCCTGAAAAAATGAAGGCTGCCATGGGAACAATGGATTATATCATCAGCACGATTTCGGCCGTCCATCCGCTGGCTCCCCTGCTTGGTCTGCTGAAGCTGAACGGAAAGCTGGTCAATGTAGGGCTGCCTAGCAAGCCTCTTCAGCTGCCTATCTTCCCCTTGGTTGGAGGAAGGAAGCTTATAGGGGGAAGCAACTTTGGAGGGCTGAAGGAGACTCAGGAGATGCTTGATTTCTGTGCAAAGCATAACATAACTGCAAATATTGAGCTGATTAAGATGGATGAGATCAACACTGCTATCGAAAGGCTCAGCAAATCCGATGTTAAATATCGCTTTGTTATTGATGTTGCAAACTCCTTCTCTTCCAGTAACATGTAG 1065 0.477 MGSSNAFGWAATDTSGHLSPFHFSRRENEADDVTLKILFCGVCHSDLHTIKNDWGFTTYPVVPGHEIVGIVTKVGSNVTKFKEGDRVGVGVIVDSCKECECCQQDLENYCPRTVYTYNSPYKGTRTQGGYSDFVVVHQRFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISGSPNKEAEAIHTLGADSFLLSSDPEKMKAAMGTMDYIISTISAVHPLAPLLGLLKLNGKLVNVGLPSKPLQLPIFPLVGGRKLIGGSNFGGLKETQEMLDFCAKHNITANIELIKMDEINTAIERLSKSDVKYRFVIDVANSFSSSNM 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04062 354 Pfam Zinc-binding dehydrogenase 186 309 IPR013149 -
Arst3g04062 354 Pfam Alcohol dehydrogenase GroES-like domain 31 142 IPR013154 -
Arst3g04062 354 SUPERFAMILY GroES-like 13 177 IPR011032 -
Arst3g04062 354 FunFam Cinnamyl alcohol dehydrogenase 159 315 - -
Arst3g04062 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 148 313 IPR036291 -
Arst3g04062 354 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Arst3g04062 354 FunFam Putative cinnamyl alcohol dehydrogenase 6 316 345 - -
Arst3g04062 354 PANTHER ALDEHYDE REDUCTASE 5 348 IPR047109 GO:0016616
Arst3g04062 354 FunFam probable cinnamyl alcohol dehydrogenase 9 167 - -
Arst3g04062 354 Gene3D - 9 345 - -
Arst3g04062 354 Gene3D - 159 315 - -
Arst3g04062 354 CDD CAD1 7 344 IPR047109 GO:0016616
Arst3g04062 354 SMART PKS_ER_names_mod 16 343 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04062 Arst-Chr3 114155251 114158420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04062 4 349 Monolignol Biosynthesis Gene Families AT2G21730 72.493 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04062 K00083 - gmx:100819684 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04062 3 114155251 114158420 Arst3g04062 3 114155251 114158420 ECH