Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04061 ATGGATTTGGATGATTTCCGATCCATACTGGACACCGCCGGCGTCGACGTTTGGGCTTTCTTTGACGCTGCAATCGACGTCGCTTCCACCGATAACGCCGACGAATTGAAGCGCCGCCGGGACGGAATCGTGGAGCGCCTTTACGCCGCCACTGCCACGCCTCCCCGGTGTCTGAATTGCGAAGCAAATGCCGTCGAAGCACACAATCAGCAAAACAAATCGTCAGAGGACGAGGATTTGGATCCTTTTGGAGGCTTATTCGATGACGAGCAGAAGAAGATTCTAGAAATTAAGCACCAACTTGAAGATCCTCACCAGTCGGAAGATTCGTTGGCGGAGTTGCTACAGAATCTGGCGGACATGGATATTACATTCCAGGCTTTAGAGGAAACTGACATTGGGAGGAACGTGAATCGGTTAAGGAAGCATTCCTCCAGTGAAGTTCGCAGATTGGTGAAGCTTCTTGTCAGGAAGTGGAAGGAAATTGTAGATGAATGGGTGAAGCTGAAGGCACCTGGAGAACCTGCTACTGCTAGCACTGTCATTGGTGATGATGAAGATTCGCCTCAGCAGAGGAATCAACTAAATGGGCATCATCAGATTCCTGATTTTGCATGCTCGCCAAATCCAGAGAATGGCAATTTTGAGTCTTCCGAACCAAAACCAATTCCTCGCAAAGAAGCTCTGCCAAAACCAGCTCAAAAATCACCATCGCCATTACCATCGGTTCCCACTCCTCCTCCTCCTCAAAACAGACAAAAAGAGAGCAATTTTGACGCGGAGAGACTTGCTTCAGCAAGAAAACGACTTCAAGAGAACTACAAAGAGGCTGCAAATGCGAAAAAGCAAAGAACGATACAGGTGATGGACCTGCATGAGTTGCCAAAACCAAAAGCCAAGAATGTTTTCTTTGGAAAGAACAAAGGCGGCATGGGTTCTCAGGGAAGGAAATGGTGA 957 0.4817 MDLDDFRSILDTAGVDVWAFFDAAIDVASTDNADELKRRRDGIVERLYAATATPPRCLNCEANAVEAHNQQNKSSEDEDLDPFGGLFDDEQKKILEIKHQLEDPHQSEDSLAELLQNLADMDITFQALEETDIGRNVNRLRKHSSSEVRRLVKLLVRKWKEIVDEWVKLKAPGEPATASTVIGDDEDSPQQRNQLNGHHQIPDFACSPNPENGNFESSEPKPIPRKEALPKPAQKSPSPLPSVPTPPPPQNRQKESNFDAERLASARKRLQENYKEAANAKKQRTIQVMDLHELPKPKAKNVFFGKNKGGMGSQGRKW 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04061 318 MobiDBLite consensus disorder prediction 299 318 - -
Arst3g04061 318 MobiDBLite consensus disorder prediction 183 200 - -
Arst3g04061 318 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 317 IPR044790 -
Arst3g04061 318 Pfam TFIIS helical bundle-like domain 114 163 IPR017923 -
Arst3g04061 318 SMART TFS2_5 94 165 IPR003617 GO:0005634
Arst3g04061 318 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 92 172 IPR035441 -
Arst3g04061 318 MobiDBLite consensus disorder prediction 234 251 - -
Arst3g04061 318 MobiDBLite consensus disorder prediction 174 263 - -
Arst3g04061 318 Coils Coil 111 131 - -
Arst3g04061 318 Coils Coil 260 287 - -
Arst3g04061 318 CDD TFIIS_I 91 164 - -
Arst3g04061 318 ProSiteProfiles TFIIS N-terminal domain profile. 89 166 IPR017923 -
Arst3g04061 318 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 88 175 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04061 Arst-Chr3 114101410 114103803 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Arst3g04061 Med26 5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04061 - - aip:107630962 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04061 3 114101410 114103803 Arst3g04061 3 114101410 114103803 ECH
Arst3g04061 3 114101410 114103803 Arst3g04061 3 114101410 114103803 PCT