Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04033 ATGGAGTTCCTTGACGACGACGACACGAGGCCTAGGTTCCTATTCCAATCTGGATCACAGCCACCGCCTTCATCCGCTGACGACCAATCCTACAACAAACCAACCAAGACACTACTCATTGTCACCGTCTCTGCCTCCGCCATCCTCCTCTTCCTCTCTATCTTCTACATCCAAGCTGAGCCATTCAAGTCCCTCCTCCTCTGGCTCTCCCTCTCCCTCCTCGTTGGACCTTTCGCCCCTCCTTCCCTCACCGCCGGAGATATCCGTGTAGGCCGGGGCTCCATCCTCGAATTCCCCGACCAACAAGCCCTCGCCGAAGACGATGACAACAAGAAGAAATATCAGCGCCGATCCAAATCCCGCAGATCCGACGAAGTCCAATCTGTCGCCGCCGTTGTCTCTCCAGTCGTCAAATCGCCGGAGCGGGAGGCTGAGAAGATCCGAGCCAACGGAAACGGAAACGGAAATGGCGTTGTGTCGGAGAAGGAGTGGAGTGAAGAGGATGTGGAGATTCTGAAGAAGCAGATGACGAAGCATCCCGTCGGGAAGCCAGGGCGGTGGGAGGCGATAGCGGCGGCGTTTGGCGGGAGACACGGAGCGGAGAGCGTGATAAAGAAGTCGAAGGAGTTGGCGGAGAAGAAGGTGGACGATTCGGAGTCGTACGCGCAGTTCCTGAAGAAGAGGAAGCCTGTGGACAAGAGAGTGGTGGAAGAGGCGGCGGAGGAGGAGGAGAAGAACGGTGGTTCTGGTGCCGTTGGTGACGGCACGTGGAGTTCAGGCGAGGACATTGCGCTGCTGAATGCTCTGAAAGCGTTCCCGAAGGAGGCTGCGATGAGATGGGAGAAGGTGGCTGCTGCGGTTCCCGGGAAGTCAAAGGCCGCTTGCATGAAAAGAGTTACTGAATTGAAGAAAGGGTTTCGGAATGCAAAAGCTGCTTCTGCCGATAAGGTAGAATAG 957 0.5643 MEFLDDDDTRPRFLFQSGSQPPPSSADDQSYNKPTKTLLIVTVSASAILLFLSIFYIQAEPFKSLLLWLSLSLLVGPFAPPSLTAGDIRVGRGSILEFPDQQALAEDDDNKKKYQRRSKSRRSDEVQSVAAVVSPVVKSPEREAEKIRANGNGNGNGVVSEKEWSEEDVEILKKQMTKHPVGKPGRWEAIAAAFGGRHGAESVIKKSKELAEKKVDDSESYAQFLKKRKPVDKRVVEEAAEEEEKNGGSGAVGDGTWSSGEDIALLNALKAFPKEAAMRWEKVAAAVPGKSKAACMKRVTELKKGFRNAKAASADKVE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04033 318 CDD SANT 163 197 IPR001005 -
Arst3g04033 318 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 124 312 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Arst3g04033 318 Gene3D - 249 317 - -
Arst3g04033 318 CDD SANT 256 303 IPR001005 -
Arst3g04033 318 MobiDBLite consensus disorder prediction 232 257 - -
Arst3g04033 318 MobiDBLite consensus disorder prediction 106 127 - -
Arst3g04033 318 SUPERFAMILY Homeodomain-like 158 200 IPR009057 -
Arst3g04033 318 MobiDBLite consensus disorder prediction 13 31 - -
Arst3g04033 318 Gene3D - 157 217 - -
Arst3g04033 318 MobiDBLite consensus disorder prediction 106 124 - -
Arst3g04033 318 MobiDBLite consensus disorder prediction 1 31 - -
Arst3g04033 318 MobiDBLite consensus disorder prediction 232 248 - -
Arst3g04033 318 ProSiteProfiles Myb-like domain profile. 255 303 IPR001005 -
Arst3g04033 318 SUPERFAMILY Homeodomain-like 253 303 IPR009057 -
Arst3g04033 318 SMART sant 160 213 IPR001005 -
Arst3g04033 318 SMART sant 253 305 IPR001005 -
Arst3g04033 318 FunFam Myb family transcription factor 253 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04033 Arst-Chr3 113673471 113674772 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst3g04033 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04033 - - ahf:112791142 561.222