Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04021 ATGTCCACAACCAAATCTAAACCCATATTCTTGTTCTTCAAAACCCCAACTTGTGCCATGGCCTCCCTCATTTCCCTTCTCTCCCTCTCCCTCCTACTCTTCTTCACCCTCTCCTCCGCCACGCGCCACCACCACAACAACAACAACAACCACAATTCCCACACTCCCTCCACCCCCACACCCACCCCCATTGCCGCCGTCTCACCCGCAATCCAACAAGCCTGCAAGGGCACGCGATTTCCCCAGCAATGCGAGTCCACTCTCTCCCAATCCACCACTCTCCCGCCCAACCCAACCTCACTCCAGCTCCTCCAATCTGCCATCTCCGCCTCCTCCAACAACCTTAAAACCGCCCAGTCCATGGTCAAGTCCATCCTCGACACCTCTTCCGACAGCCGCAACCGCACCGTCGCCGCCACCACATGCCTCGAGGAACTCGCCAACTCCGACCACCGCCTATCCCAAGCCAACGATGCCCTGACACGTGACAAGACCAAGGACGCCCGCGCCTGGCTTACCGCCGCCCTTGTCTACCAGTACGACTGCTGGAATGGCCTCAAGTACGCCAACGACACATCCAAGGTCGGCGAAACGATGTCGTTTATCGACAACCTCACCCAACTCTCAAGCAACGCGCTCTCCATGGCCTTCTCCTACGACGCCTACGGGAAAGACCCGGCGACGTGGAAGCCTCCGGCGACAGAGCGCGACGGGTTCTGGGAAGCGACAGGATCTTCGGGCGGAGGTTCCGTACCAGGGTTCCCGACGGGCCTGAAGCCGGACGCTACGGTGTGCAAGGATGGCAGCAATGGGTGTTACAAGACGGTACAGGAAGCGGTTAACGCGGCGCCGAGTAACGGTAACGGCGGAAAGAGGTTCGTGATATACATTAAGGAAGGGGTATATGAAGAGACCGTCAGAGTTCCGTTAGAGAAGACGAATTTGGTGTTCTTGGGCGACGGCATGGGGAAAACGGTAATTACTGGCTCTGCTAACGCTGGCCAGCCCGGCATGACCACTTACAACTCTGCTACAGTCGCGGTTCTTGGGGATGGGTTCATGGCGAAGGATCTCACAATACAGAACACTGCTGGGCCTGATGCTCACCAAGCAGTGGCCTTCAGACTAGACAGCGATCTCTCAATCATTGAGAACTGTGAATTCATAGGCAACCAAGACACTCTCTATGCTCATTCCCTGCGCCAGTTCTACAAATCGTGCCGGATTATCGGGAACGTAGATTTCATCTTCGGCAACTCGGCCGCCATCTTCCAAGACAGCCAAGTCTTGGTGGCTCCAAGGCAAGTGAAGCCAGAGAAGGGGGAGAACAACGCTGTGACGGCGCACGGCAGGACAGATCCTGCACAGTCAACCGGGTTTGTGTTCCAGAACTGCCTGATCAATGGCACCGAGGAATACATGAAGTTGTATAATAGCAATCCCAAAGTGCATAAGAACTACTTGGGTAGGCCTTGGAAAGAGTACTCTAGAACAGTTTTCCTGAATTGCTTCTTGGAAGCATTGATCACACCCCAGGGTTGGATGCCATGGACTGGTGACTTTGCTCTCAAGACACTCTACTATGGAGAATTTGAGAATAAGGGACCTGGTTCTGATTTGTCTCAGAGGGTATCCTGGAGTAGCAAGGTCCCCTCGGAGCATGTTTTTGCTTATTCAGTGCAGAATTTCATCCAAGGAGATGAGTATATTCAATAA 1716 0.5425 MSTTKSKPIFLFFKTPTCAMASLISLLSLSLLLFFTLSSATRHHHNNNNNHNSHTPSTPTPTPIAAVSPAIQQACKGTRFPQQCESTLSQSTTLPPNPTSLQLLQSAISASSNNLKTAQSMVKSILDTSSDSRNRTVAATTCLEELANSDHRLSQANDALTRDKTKDARAWLTAALVYQYDCWNGLKYANDTSKVGETMSFIDNLTQLSSNALSMAFSYDAYGKDPATWKPPATERDGFWEATGSSGGGSVPGFPTGLKPDATVCKDGSNGCYKTVQEAVNAAPSNGNGGKRFVIYIKEGVYEETVRVPLEKTNLVFLGDGMGKTVITGSANAGQPGMTTYNSATVAVLGDGFMAKDLTIQNTAGPDAHQAVAFRLDSDLSIIENCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSAAIFQDSQVLVAPRQVKPEKGENNAVTAHGRTDPAQSTGFVFQNCLINGTEEYMKLYNSNPKVHKNYLGRPWKEYSRTVFLNCFLEALITPQGWMPWTGDFALKTLYYGEFENKGPGSDLSQRVSWSSKVPSEHVFAYSVQNFIQGDEYIQ 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04021 571 MobiDBLite consensus disorder prediction 45 64 - -
Arst3g04021 571 Pfam Pectinesterase 261 567 IPR000070 GO:0030599|GO:0042545
Arst3g04021 571 Pfam Plant invertase/pectin methylesterase inhibitor 70 215 IPR006501 GO:0004857
Arst3g04021 571 PANTHER PECTINESTERASE 36 564 - -
Arst3g04021 571 FunFam Probable pectinesterase/pectinesterase inhibitor 51 69 218 - -
Arst3g04021 571 Gene3D - 258 571 IPR012334 -
Arst3g04021 571 FunFam Pectinesterase 255 571 - -
Arst3g04021 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 215 IPR035513 -
Arst3g04021 571 NCBIfam pectinesterase inhibitor domain 64 214 IPR006501 GO:0004857
Arst3g04021 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 218 IPR035513 -
Arst3g04021 571 SUPERFAMILY Pectin lyase-like 257 570 IPR011050 -
Arst3g04021 571 CDD PMEI-like_3 74 215 - -
Arst3g04021 571 SMART PMEI_2 66 215 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04021 Arst-Chr3 113251993 113254834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04021 63 569 Carbohydrate Esterase AT5G09760 68.945 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04021 - - mtr:11442613 837.795