Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04010 ATGGAAAAAGGAAAATTAATTCCGGGATTTCATTTCAATCCCACTGATGTAGAGCTTCTAAAGTATTTTTTGAAGAGAAAAGTGACAGGCAAAAAGCTACCCAATGTGATTGCTGAGATTAACGTTTATCAGTATTGTCCCTGGGATCTCCAAGGTAAGTCACATCTGAAAAGTGGGGATTTGGAGTGGTACTTCTTCTGTGCAAGAGGAAAAAATTATGGAATTGGGTCGAAGACGAACCGTGCTATAAAGAATGGGTACTGGAAAGCTACTGGTATGGACAAAGCTATTGTTCAGCATGACAAGCAAACAGTGGGGATGATGAAAACCCTTGTTTTCCACACTGGGAAACCGCCTCATGGGACCCGAACTGATTGGGTTATGCATGAGTATAGGCTTCAAGATAAAGACCTTACTGATAAAGGAATTGCTCAGGACTCTTATGTTATCTGTAAGGTGTTCCGAAAGGAGGGTCATGGCCCACGGAGCGGTGCACAATATAGGAAACCATTTAATGAAGAAGATTGGGATGATGATGATGACGATGATGATGATCATCACGTTGTTGAGGAGGGGGGAACCCCTTCAACTGCTTTGGTTGCGCCGGTTTCCATTCAGTCTATGACATTGGATGGCTCTTCTTACATGAAGGCAACCTCTGTTTCATGTGAGTCGGGACCTGTGGCTACTTCTCCTGTCCCATCAACTCCTTCTTCAGATGCAAGCATTCACACGGTTAATAATTCAACAGTGACTGATCTCTCCAAAGACGAAAAAACAGTACCTAAGGAAAATATTGCTGCCGGTGACCTCTTGAGTAAGTTTTTTGAGGGTTTGGAAGACCTCGAGTCTGAATACACTCCAAATGGAATGGGCTTGGATGGCTTCGCCCCAAATGGAATAAACTATGATGACTTGGGGCACTTGGATTTGATTGATTGCAATTTCCTCTAG 954 0.4329 MEKGKLIPGFHFNPTDVELLKYFLKRKVTGKKLPNVIAEINVYQYCPWDLQGKSHLKSGDLEWYFFCARGKNYGIGSKTNRAIKNGYWKATGMDKAIVQHDKQTVGMMKTLVFHTGKPPHGTRTDWVMHEYRLQDKDLTDKGIAQDSYVICKVFRKEGHGPRSGAQYRKPFNEEDWDDDDDDDDDHHVVEEGGTPSTALVAPVSIQSMTLDGSSYMKATSVSCESGPVATSPVPSTPSSDASIHTVNNSTVTDLSKDEKTVPKENIAAGDLLSKFFEGLEDLESEYTPNGMGLDGFAPNGINYDDLGHLDLIDCNFL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04010 317 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Arst3g04010 317 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Arst3g04010 317 MobiDBLite consensus disorder prediction 159 195 - -
Arst3g04010 317 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Arst3g04010 317 MobiDBLite consensus disorder prediction 223 244 - -
Arst3g04010 317 MobiDBLite consensus disorder prediction 159 173 - -
Arst3g04010 317 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Arst3g04010 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04010 Arst-Chr3 112860031 112862534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04010 1 273 NAC Transcription Factor Family AT5G64060 43.066 5.32e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g04010 NAM 2.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04010 - - adu:107480257 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04010 3 112860031 112862534 Arst3g04010 3 112860031 112862534 PCT