Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04000 ATGCCGGCGTGGTGGAGTAGAAAATCCTGCAAGAACAAACAGCAGAATCAGGGTGAGGTTGAAGATGAGGAAGAGACACGTGGCAGGCAGAAATTCAATCTGATAGGATCGCCGATTAGCATTATCAGCAGCAGGAAGAAAGGCAAGGACAAGAACAAGAACAACAAGAGCTTCGATGAGCTTATCGCCTCTCGCAACTCACCGAGGACAAGCAAGGAATTCGCCAGCGTCGACGGTAACGACAATAACAGAGACCGAGACAGAGGGCTTCCGTTGCCTCGCCCTACGGTTTCGGCCAATCACAGCTTCAACAACGATCAGGGCCTCGTCTTTGGATCTACTTCGCTATCTGGTTCCAGCGTCAGCTCCTCAACCTCTTACGATGACCACCCTATATCTCCTCAATTCATTAACAACAGAGGACAAGGTGACATCAAATTCCATGTGAGGCCAAAGAGCCCAGGTGCCGGGTCAAGGGGGCCGACAAGCCCTACATCGCCACTTCATCAGAGGATTTTGAGTCTCGACTCTCCTACAGGCAAGCAAGACGATGGAAAAAGTGAATGTCACCCCTTGCCTCTTCCCCCTGGCTCTCCTACTAGTCCTTCCACCCTTTCCACCCCACGGGCAAATGGATCCTTAGAAAACAACGCCAGTAATCTGTCGAAGTGGAAGAAAGGAAAGCTTCTAGGAAGGGGAACTTTTGGGCATGTTTATCTTGGATTTAATAGTGAGAGTGGACAAATGTGTGCAATAAAGGAAGTCAGGGTTGTCTCTGATGATCCAACATCAAAAGAGTGCCTCAGACAACTTAATCAGGAGATAAACTTGCTTAATCAGCTTTCACATCCAAACATTGTTCAATACTATGGGAGTGAACTGGGTGAAGAAACACTATCAGTTTATTTGGAGTATGTTTCTGGTGGTTCTATCCATAAATTGCTACAGGAATATGGTTCATTTAAGGAGCCTGTCATTCAAAATTATACCAGGAAGATTGTATCTGGGCTTGCTTATTTGCATGCAAGAAATACAGTACACAGAGATATCAAAGGAGCTAACATACTTGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACTTATAAATTCTGCTGCCTCAGTACTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACCAATGGCTATGGTCTTCCAGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACGTCGAAGCCTCCATGGAATCAATATGAAGGGGTAGCTGCCATATTTAAAATTGGTAACAGCAAAGATATGCCTGAAATCCCTGAACATCTTTCAGATGATGCCAAAAGCTTCATTAAGCTATGTTTAAATAGGGACCCGTTAGCACGCCCAACAGCTCAAATGCTACTAGACCACCCCTTCATTCGTGACCAATCAGCAACAAAAGCTGTAAATGTTAGCATAACCAGAGATGCTTTCCCCCGCATGTTAGATGGAAGCCGGACTCCGCCGCCTGTTTTGGAGCATCAATCCAATAGAACAAGTATAACGTCACTTGATGGAGATCATGCAACAAAGACAGCTCGAGCAGCTTCTCACGCATTAAGGAGCCCAAGAGACAACGCAAGAACAATCACATCTTTGCCAGTGTCTCCCTCTTCAAGTCCATTGAGACAATATGGGACAGNNNGTTTCTTTTCTCCTCCTCATCCAACTTACACAATGATGGGGCAAAATAATTTCAATTTGAGTGACACGTCGCCATATTCTGTGAGATCAAATGCAGCATTCACTCTCGATCCTTGGCATGAAACGTCTCGATACAAAGCCCAAACACCACTTGGTGGATCTCCAAGAATGAGATTCATTTGA 1887 0.4499 MPAWWSRKSCKNKQQNQGEVEDEEETRGRQKFNLIGSPISIISSRKKGKDKNKNNKSFDELIASRNSPRTSKEFASVDGNDNNRDRDRGLPLPRPTVSANHSFNNDQGLVFGSTSLSGSSVSSSTSYDDHPISPQFINNRGQGDIKFHVRPKSPGAGSRGPTSPTSPLHQRILSLDSPTGKQDDGKSECHPLPLPPGSPTSPSTLSTPRANGSLENNASNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDPTSKECLRQLNQEINLLNQLSHPNIVQYYGSELGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRKIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKLINSAASVLSFKGSPYWMAPEVVMNTNGYGLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSDDAKSFIKLCLNRDPLARPTAQMLLDHPFIRDQSATKAVNVSITRDAFPRMLDGSRTPPPVLEHQSNRTSITSLDGDHATKTARAASHALRSPRDNARTITSLPVSPSSSPLRQYGTXXFFSPPHPTYTMMGQNNFNLSDTSPYSVRSNAAFTLDPWHETSRYKAQTPLGGSPRMRFI 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04000 628 MobiDBLite consensus disorder prediction 158 177 - -
Arst3g04000 628 Pfam Protein kinase domain 225 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04000 628 Gene3D Transferase(Phosphotransferase) domain 1 221 502 - -
Arst3g04000 628 SMART serkin_6 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04000 628 MobiDBLite consensus disorder prediction 500 568 - -
Arst3g04000 628 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 31 488 - -
Arst3g04000 628 SUPERFAMILY Protein kinase-like (PK-like) 221 567 IPR011009 -
Arst3g04000 628 MobiDBLite consensus disorder prediction 510 527 - -
Arst3g04000 628 MobiDBLite consensus disorder prediction 44 58 - -
Arst3g04000 628 CDD STKc_MEKK1_plant 223 480 - -
Arst3g04000 628 MobiDBLite consensus disorder prediction 97 140 - -
Arst3g04000 628 MobiDBLite consensus disorder prediction 203 218 - -
Arst3g04000 628 FunFam Mitogen-activated protein kinase kinase kinase 222 504 - -
Arst3g04000 628 MobiDBLite consensus disorder prediction 59 77 - -
Arst3g04000 628 ProSiteProfiles Protein kinase domain profile. 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g04000 628 MobiDBLite consensus disorder prediction 544 566 - -
Arst3g04000 628 MobiDBLite consensus disorder prediction 14 30 - -
Arst3g04000 628 MobiDBLite consensus disorder prediction 1 218 - -
Arst3g04000 628 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04000 Arst-Chr3 112576795 112581864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04000 1 544 MAP Kinase Kinase Kinase AT1G53570 57.754 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst3g04000 Pkinase 6.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04000 K04421 - gmx:100787064 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04000 3 112576795 112581864 Arst3g04000 3 112576795 112581864 ECH
Arst3g04000 3 112576795 112581864 Arst3g04000 3 112576795 112581864 PCT
Arst3g03681 3 102385751 102392844 Arst3g04000 3 112576795 112581864 PCT