Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03996 ATGGCTAGCACCTTCAACAATGTCAAGGACATTGATGCATCCCATGACAACTTGACCTATAGGATCAAGGTGCGTTTGATTAAGATTTGGACTCTATCTACGGCTGAGCAGAAATTTCAAAAGCCAATGCTGGAGCTGGTGGTCATGGATAATCAAGGAGATCGGATCCAATGTTCAATTCGAAACCCTCATAGGAGGTTATTTGAGGCCGACCTTACCGAAGGGAAAATATACACTATCTCCAATTTTTCAGTTGCTCAGAATGACCTCAAGTACAAAGCCACCAATCATGTTAGCAGAATATATTTTAAGAGAGATACCCAGCTTAGGGTGGTTCAGGATCCTCTATTCCTTACACATATTTTTTGCTTTGTGCCCAATGAAGTAATACTTAACCACACCAATGCTCAGTCCCATTTAATTGATTTAATTGGGCTCCTCACTGCTAAGGGTGACATTATTGAATTCACAAAGAATGGAAAGAAGTCCATTTACATTGTCATAGAACTTGATGACCTGAGAGAAAATGGTACCATTCGATGTACTTTGTGGGAAGAATTTGTAACTAAATTGGTAAAGCATATGGAAGAGACACCAACCTCAGAATATATACTTATTATACAATTTGCGAAGTTTAACCTATTTAAAGGTACAATGGGTATATCAAACACCAACTACAATTCCATTCTGCACATCAACGGTGATTTTCAAGAGGTAAAGGATTTTCGCAAGAGTGTCATAATATCAGGTGTACCTGCTACAACTCAAGTTTCTCAAATACCGGGAGAGCCGACATATTCACTCGAAGAGGACCTACTTAACCATTCCATTTATAAGCCCATCTCCGAGCTGAAGGATTCAATTGAGATTAATATAACCAAACATGCAGAATGGCTCTTTGTCACTATTGGCACGGTTATATCCATTGATCCTAAGAATGGGTGGTGGTACAAGAGTTGCAAGCATTGCTTCCATTCTTTACAAGAAGCCGAGAACTCATACCACTGTGCTAGGTGTGAGACATACCCATCGTCTCACACTCCAAGGTTTAGCATAAACATGCGAGTTGCTGATGAGACCGATACGGCTTCTTTCCTACTGTACGATAAGGAGGTGTCCAAATTCCTTGGGTGGAGTTAA 1140 0.4026 MASTFNNVKDIDASHDNLTYRIKVRLIKIWTLSTAEQKFQKPMLELVVMDNQGDRIQCSIRNPHRRLFEADLTEGKIYTISNFSVAQNDLKYKATNHVSRIYFKRDTQLRVVQDPLFLTHIFCFVPNEVILNHTNAQSHLIDLIGLLTAKGDIIEFTKNGKKSIYIVIELDDLRENGTIRCTLWEEFVTKLVKHMEETPTSEYILIIQFAKFNLFKGTMGISNTNYNSILHINGDFQEVKDFRKSVIISGVPATTQVSQIPGEPTYSLEEDLLNHSIYKPISELKDSIEINITKHAEWLFVTIGTVISIDPKNGWWYKSCKHCFHSLQEAENSYHCARCETYPSSHTPRFSINMRVADETDTASFLLYDKEVSKFLGWS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03996 379 CDD RPA1_DBD_B_like 142 247 - -
Arst3g03996 379 PANTHER OS03G0429900 PROTEIN 16 376 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst3g03996 379 SUPERFAMILY Nucleic acid-binding proteins 5 115 IPR012340 -
Arst3g03996 379 Pfam Replication factor-A C terminal domain 301 378 IPR013955 -
Arst3g03996 379 Gene3D - 5 114 IPR012340 -
Arst3g03996 379 Gene3D - 273 379 IPR012340 -
Arst3g03996 379 SUPERFAMILY Nucleic acid-binding proteins 137 249 IPR012340 -
Arst3g03996 379 Gene3D - 118 250 IPR012340 -
Arst3g03996 379 CDD RPA1_DBD_A_like 21 107 - -
Arst3g03996 379 SUPERFAMILY Nucleic acid-binding proteins 279 379 IPR012340 -
Arst3g03996 379 Pfam Domain of unknown function DUF223 45 135 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03996 Arst-Chr3 112443456 112447188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03996 19 377 Core DNA Replication Machinery Family AT5G08020 19.947 6.86e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03996 - - adu:107479382 773.081