Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03950 ATGAAGAGTGAATTGGAATTACCACCTGGATTCAGGTTCCACCCCACTGATGAGGAGCTTGTGAATCACTACTTGTGCAAGAAATGTGCTTCACAGTCAATTGCTGTTCCTATCATCAAGGAGATCGATTTGTACAAGTTTGATCCATGGCACCTTCCAGAGATGGCTCTATACGGCGAGAAAGAGTGGTATTTCTTCTCTCCCAGGGACCGCAAATATCCGAACGGATCACGCCCAAACCGGGCTGCGGGTACAGGGTACTGGAAGGCCACAGGTGCCGATAAGCCCATTGGAAAGCCCAAGGCCCTGGCCATCAAGAAGGCACTGGTGTTTTACGCTGGCAAAGCCCCCAAAGGAGTGAAAACCAATTGGATCATGCATGAATATAGACTCGCTAATGTTGACAGATCCGCAGGCAACAAGAAAAATAACTTAAGGCTTGATGATTGGGTGCTATGCCGAATTTACAACAAGAAAGGAAAGATTGAGAAATACAACCATCTTGGGGCGGCGGATCACAAATCAGCATCTTCGTCGGAGGAGAATGAGAGGAAGCCGGAGGTGAAGGAGCGATTGCATATGGATACGTCGTCGGATTCGGTGGTATCGGCGGATGTGACGTGGGAGAGTAGGGAGGTGCAGAGCGAGCCAAAGTGGAATGACCTGCTTGACCAAGTCTTTGATTTCCAGTTAGGCAGTTTCGTTGATTTCTCATCGGCTGGAGATGACCCTTTTGCCCCCCAGCTCTCTCCTTGGCATCAGGACACGTTCATCACATTTTAA 783 0.4904 MKSELELPPGFRFHPTDEELVNHYLCKKCASQSIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALAIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGNKKNNLRLDDWVLCRIYNKKGKIEKYNHLGAADHKSASSSEENERKPEVKERLHMDTSSDSVVSADVTWESREVQSEPKWNDLLDQVFDFQLGSFVDFSSAGDDPFAPQLSPWHQDTFITF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03950 260 FunFam NAC transcription factor 16 162 - -
Arst3g03950 260 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Arst3g03950 260 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Arst3g03950 260 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Arst3g03950 260 MobiDBLite consensus disorder prediction 171 196 - -
Arst3g03950 260 PANTHER NAC TRANSCRIPTION FACTOR 56 7 193 - -
Arst3g03950 260 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03950 Arst-Chr3 111518339 111519633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03950 1 260 NAC Transcription Factor Family AT5G08790 65.074 2.49e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g03950 NAM 9.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03950 - - gmx:100170751 374.015