LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g03926	ATGTTTCACACAAAATTTATCCGGGATCCTCTGACAATGTTGACAAGTTGGCTCATATTCCTTAGTGTCTTGAAACTCACCTATGCAGTGAAGGAACCTGATATAGAAGGTGAAGCGCTGCTTGATCTTTTGAAGAATCTGAATGATTCCAATAATGGAATACAAGACTGGAACAGTTATATGGTGAGCCCGTGTTTCAGTTGGTCTCATGTCACTTGTAGAAACGGACATGTTGTATCTCTGGCCCTGGATTCAATTGGATTCTCTGGAACACTTTCTCCCTCAATTCTCAAATTGAAATATCTGGTTACCTTGGAATTGCAGAACAACAAACTTTCAGGCCCCTTGCCTGATTATATTGCCAACTTGACAACCCTGCAATATCTGAATCTTGCTGGCAATAACTTCATAGGCTCTGTACCAGCTTCATGGGCTCAACTTTCCACTCTCGAACATTTGGATCTTTCATCAAATCGTCTCACTGGAACTATCCCATTGCAACTCTTTTCAATTCCAGTGTTCAATTTTTCAAATACACAGCTTTATTGTGGTTCTAAGTTGGAGCAGCCATGTGATTCTAAATCCGACCGTCCAGCTTCAAAGAAGAAACCAAAACTTGCACAGGCAGTACAGTTTGCAAGTTGTGGTGCATTTGCACTTGTGTGTCTTGGGGCAATCTGCACATACAGATACCATCAAATGCACAAACAAAAAAGTGATGTCTTTGTTGATGTGTCAGGTGAGGATGAAAGCAAGATATCTTTTGGACAACTGAAAAGATTTTCATGGCGAGAACTCCAAGTTGCTACAAAAAGCTTCAGTGAAAGCAATGTAATAGGGCAGGGAGGATTTGGAAAAGTGTACAAAGGTATACTGTCGGATAATACCAAAATCGCCGTGAAACGCCTCACTGATTATCATAATCCCGGCGGAGAGGCCGCATTCGAGAGAGAAGTTCATCTTATCAGTGTTGCAGTTCATAGAAACCTCCTCAGACTAATTGGATTCTGTACAACCTCAACTGAGAGAATCCTAGTATACCCTTTCATGGAGAATCTAAGTGTAGCATATAGACTAAGAGATTTGAAAGCAGATGAGAAAGGTTTGGATTGGGGTGCAAGAAAGCGAGTGGCTTTTGGTACAGCACATGGTTTGGAGTATCTGCACGAACAATGCAACCCCAAGATAATACATCGCGATCTGAAGGCAGCAAACATCCTACTAGATGATGAGTTTGAAGCAGTACTTGGGGATTTCGGGCTAGCCAAGCTTGTTGACACAAGAATGACCCATGTTACTACTCAAGTCCGCGGCACAATGGGTCATATAGCCCCTGAATACTTGTCCACTGGAAAATCATCCGAAAAGACTGATGTCTTTGGATATGGTATCACACTTCTTGAACTGGTCACCGGCCAGCGCGCAGTAGACCTCTCTAGGCTTGAAGAAGAGGAGGATGTTCTTCTAATTGATCATGTTAAGAAGCTTCTGAAGGAGAACAGGTTGGAGGACATAGTGGATAGAAACTTGGAGAGTTATGATCCGAAAGAAGTGGAGAGAATTCTTCAGGTTGCATTGTTGTGCACACAATGCTACCCTGAGGATCGACCAATCATGTCTGAGGTTGTGAAAATGCTGCAAGGAGTGGGGTTAGCTGATAGATGGGCAGATTGGAAGCAAGTTGAAGATGCAAGGACTCATCAACAATTCTCACAAACCACTCATCAATTTCCTTGGAGTGATGAATCCACCCATGAACAAGAGGCCATTCAGCTTTCCAGGGCAAGATAA	1791	0.4277	MFHTKFIRDPLTMLTSWLIFLSVLKLTYAVKEPDIEGEALLDLLKNLNDSNNGIQDWNSYMVSPCFSWSHVTCRNGHVVSLALDSIGFSGTLSPSILKLKYLVTLELQNNKLSGPLPDYIANLTTLQYLNLAGNNFIGSVPASWAQLSTLEHLDLSSNRLTGTIPLQLFSIPVFNFSNTQLYCGSKLEQPCDSKSDRPASKKKPKLAQAVQFASCGAFALVCLGAICTYRYHQMHKQKSDVFVDVSGEDESKISFGQLKRFSWRELQVATKSFSESNVIGQGGFGKVYKGILSDNTKIAVKRLTDYHNPGGEAAFEREVHLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKADEKGLDWGARKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAVDLSRLEEEEDVLLIDHVKKLLKENRLEDIVDRNLESYDPKEVERILQVALLCTQCYPEDRPIMSEVVKMLQGVGLADRWADWKQVEDARTHQQFSQTTHQFPWSDESTHEQEAIQLSRAR	596

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g03926	596	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	17	556	-	-
	Arst3g03926	596	FunFam	Leucine-rich repeat receptor-like kinase	36	143	-	-
	Arst3g03926	596	SMART	serkin_6	273	546	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g03926	596	Gene3D	Ribonuclease Inhibitor	143	186	IPR032675	-
	Arst3g03926	596	Gene3D	Ribonuclease Inhibitor	35	142	IPR032675	-
	Arst3g03926	596	Pfam	Leucine rich repeat N-terminal domain	36	73	IPR013210	-
	Arst3g03926	596	FunFam	Somatic embryogenesis receptor-like kinase 1	350	566	-	-
	Arst3g03926	596	Pfam	Leucine rich repeat	102	160	IPR001611	GO:0005515
	Arst3g03926	596	SUPERFAMILY	L domain-like	37	181	-	-
	Arst3g03926	596	ProSitePatterns	Protein kinases ATP-binding region signature.	279	301	IPR017441	GO:0005524
	Arst3g03926	596	Gene3D	Transferase(Phosphotransferase) domain 1	350	566	-	-
	Arst3g03926	596	FunFam	Somatic embryogenesis receptor kinase 1	242	349	-	-
	Arst3g03926	596	ProSiteProfiles	Protein kinase domain profile.	273	556	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g03926	596	Pfam	Protein kinase domain	274	544	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g03926	596	MobiDBLite	consensus disorder prediction	570	586	-	-
	Arst3g03926	596	MobiDBLite	consensus disorder prediction	570	596	-	-
	Arst3g03926	596	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	396	408	IPR008271	GO:0004672\|GO:0006468
	Arst3g03926	596	Gene3D	Phosphorylase Kinase; domain 1	242	349	-	-
	Arst3g03926	596	SUPERFAMILY	Protein kinase-like (PK-like)	251	547	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g03926	Arst-Chr3	110864169	110867313	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g03926	33	596	Receptor kinase-like Gene Family	AT5G10290	55.912	0.0	652

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Arst3g03926		Pkinase	1.2e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g03926	-		-	gmx:100800886	981.474