Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03864 ATGGGCCCTGACGCATTCACGTCCACCCTGTTCAAGTGGGATCCGCGCACCATCCTCCCAACTTGTTCTTCCTCACTGATGGAGGGGACCGGGGGGCTGGAGGAGCTGTTCCATGCATACGGGGTGAGGTACTACACGGCGGCGAAGGTGGCAGAGCTAGGGTTCACAGCAAGGACGCTGGTGGACATGAAAGAGGAGGAGCTGGAGCACATGATGAACAGCCTTTCCCAGATCTTCCGTTGGGATCTGCTGGTTGGCGAGCGCTATGGCATCAAAGCTGCCGTCCGAGCTGAGCGTAGACGCATCCAAGACCATCATCAACTTCGAATTGATTCTCTCTCTCAAGAAGGGGTGCAACAACATAAAGAGGCGGTGGGGAGCACGTGGGACGTCAGGAAGAGGATGAGAAGCAGAAGCAAGATGATGAGCGATGAGGAGGAAGAAGAAGAGGAGGAGGAGGAGAGACAGAGAGAGCACCCGTTCATAGTGACGGAGCCTGGGGAAGTGGCGCGTGGCAAGAAGAACGGCCTGGATTACCTATTCCATCTGTATGAGCAATGCCGTGATTTCTTGATCCAAGTCCAGCACATTGCCAAGGAACACGGTCAGAAATGCCCTACCAAGGTGACAAACCAAGTGTTTAGGTTCGCCAAGAAGGCAGGAGCTCACTGCATAAACAAGCCAAAGATGAGACACTACGTTCACTGTTACGCGCTTCACTGCCTCGACAAAGACACCTCCAATCAGCTCAGGAGGCAGTTCAAGGAGACAGGCCAGAACGTTGGGGCATGGAGGCAGGCCTGCTACAACCCTCTCGTTGCCATTGCTGCCCTCCACCACCACGACATTGATTCCATCTTTAACTCTCATCCTTGCCTTTCCATCTGGTACGTTCCCACGAAGCTTCGCCAGCTTTGTCACGCCCACAGGAACAATTCAGCTTCCACTTCCACTTCCACCTCCACCCATCATCATCTTCTCTTCTAG 987 0.541 MGPDAFTSTLFKWDPRTILPTCSSSLMEGTGGLEELFHAYGVRYYTAAKVAELGFTARTLVDMKEEELEHMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIQDHHQLRIDSLSQEGVQQHKEAVGSTWDVRKRMRSRSKMMSDEEEEEEEEEERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQHIAKEHGQKCPTKVTNQVFRFAKKAGAHCINKPKMRHYVHCYALHCLDKDTSNQLRRQFKETGQNVGAWRQACYNPLVAIAALHHHDIDSIFNSHPCLSIWYVPTKLRQLCHAHRNNSASTSTSTSTHHHLLF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03864 328 Coils Coil 132 152 - -
Arst3g03864 328 PANTHER PROTEIN LEAFY 28 326 IPR002910 GO:0003677|GO:0006355
Arst3g03864 328 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 152 314 IPR035209 GO:0003677
Arst3g03864 328 Pfam Floricaula / Leafy protein SAM domain 30 106 IPR035079 -
Arst3g03864 328 Gene3D Protein LEAFY 144 314 IPR038276 -
Arst3g03864 328 MobiDBLite consensus disorder prediction 136 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03864 Arst-Chr3 109543323 109544572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03864 1 312 Orphan Transcription Factor Family AT5G61850 54.847 5.03e-134 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Arst3g03864 C_LFY_FLO 3e-98 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03864 - - ahf:112791011 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03864 3 109543323 109544572 Arst3g03864 3 109543323 109544572 ECH