Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g03807 ATGGAAGCTTTTTCTACTTTTCCTTCTTCTTCTTACCATAATCACTACCCAATTCTTCTTGACTCGTCATCACTCTTCATCCCCAATAACACTACTACTACTACCCCTCCTCCAATAAAGCTTTATTCTTCTCTTCATCATGATCATCATATGATCAACACTACTGCTGATACTACTAGTCCCCATTATCCTCTTATTCCACCACCTAATCACCAACTCTTTCAACTTCATACATCTTCTTTGGATACTAGCTCTGTTGATCAAAGCTCCAAGGTTGTTGCTGCTACCACCAAAAGTTACAACAGTAGTGCTGATCCTTCTCCTCCTTTTCTCTCACATAACCACAGCCCTGAGTCCTCTGTGGTTGAAAACGGTGACCAAGTCACTCAGAACACTCCTCCTCCTATTAACATGGCGGACAACAAGCGGAAAACTACCTCTAACTCCTCTTCCTTCAACAACAATAAGGAGTTGTCAGCAGGTAGAGAAGGGAGAAGTAGCAAGAAACAAAGGAAGAGTAATAATGGTGGGAGTGGGGTGAAGAAGGGAGAGGAGAAGGAAAAAGAAGAGGCTCCAACAGCAACAGGGTATATCCACGTTAGAGCAAGAAGGGGCCAAGCAACTGATAGCCACAGCCTTGCTGAAAGGGTGAGAAGGGAGAAGATAAGTGAGAGGATGAAGATGTTGCAACGACTTGTGCCAGGCTGTGATAAGGTAACCGGAAAGGCCCTTGTGTTGGACGAGATCATCAATTATGTTCAGTCCCTACAAAATCAAGTAGAGTTCTTGTCAATGAAGCTTGCTTCAGTCAGCCCCTTCTTCTTTGACTTTGCAATGGACCTAGATAATGATAACAATAATGGCCACTTGGTTAGACCACTGGATCAGAACGTTCAGAATCAGAAGATAAGCAGCATAGGATCAACACCAGCACTGGCATCAGTACCACAATGCAGCACAAACCAGGTTACACCCTTTGCTGATACAACCACCATGACCACTACCACCGGTACCACCACCTTTCCCGGTGCTAATAATAATAACAGTGACTATCTTTTGGATTATTCATCAACATCACCAGTTTTCCTACAAGGACAGAGGTCATCAAATGTCTTCTCTGAGTATACCGGTGGTCAATTCTGGGAAGTAGAAGAAGACCAACGACAAAAGCAGCTTCTTCATCCATATGGACTTGGCAGCAACTTAGGTTCCTTGAATTAA 1221 0.4365 MEAFSTFPSSSYHNHYPILLDSSSLFIPNNTTTTTPPPIKLYSSLHHDHHMINTTADTTSPHYPLIPPPNHQLFQLHTSSLDTSSVDQSSKVVAATTKSYNSSADPSPPFLSHNHSPESSVVENGDQVTQNTPPPINMADNKRKTTSNSSSFNNNKELSAGREGRSSKKQRKSNNGGSGVKKGEEKEKEEAPTATGYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLASVSPFFFDFAMDLDNDNNNGHLVRPLDQNVQNQKISSIGSTPALASVPQCSTNQVTPFADTTTMTTTTGTTTFPGANNNNSDYLLDYSSTSPVFLQGQRSSNVFSEYTGGQFWEVEEDQRQKQLLHPYGLGSNLGSLN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g03807 406 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 206 256 IPR011598 GO:0046983
Arst3g03807 406 SMART finulus 212 262 IPR011598 GO:0046983
Arst3g03807 406 MobiDBLite consensus disorder prediction 97 214 - -
Arst3g03807 406 MobiDBLite consensus disorder prediction 97 160 - -
Arst3g03807 406 CDD bHLH_AtBPE_like 196 281 - -
Arst3g03807 406 Gene3D - 203 271 IPR036638 GO:0046983
Arst3g03807 406 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 97 313 IPR024097 GO:0006355
Arst3g03807 406 MobiDBLite consensus disorder prediction 178 194 - -
Arst3g03807 406 Pfam Helix-loop-helix DNA-binding domain 210 257 IPR011598 GO:0046983
Arst3g03807 406 FunFam Basic helix-loop-helix transcription factor 203 275 - -
Arst3g03807 406 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 204 271 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g03807 Arst-Chr3 108378537 108381292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g03807 126 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 60.510 8.99e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g03807 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g03807 - - ahf:112732895 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g03807 3 108378537 108381292 Arst3g03807 3 108378537 108381292 ECH